Evidence map›Paper›PMID 23887148›Full record

ArticleRNA (New York, N.Y.)2013

2-Selenouridine triphosphate synthesis and Se-RNA transcription.

Huiyan Sun, Sibo Jiang, Julianne Caton-Williams, Hehua Liu, Zhen Huang

Open access · bronzeAbstract read
In one paragraph

Article in RNA (New York, N.Y.), 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.0field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
  2. Biogenic propane production by a marineFrontiers in microbiology · 2022
    Article
  3. Article
  4. Review
  5. Metabolic Incorporation of Azide Functionality into Cellular RNA.Chembiochem : a European journal of chemical biology · 2016
    Article
  6. Article
  7. Novel complex MAD phasing and RNase H structural insights using selenium oligonucleotides.Acta crystallographica. Section D, Biological crystallography · 2014
    Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Huiyan SunDepartment of Chemistry, Georgia State University, Atlanta, Georgia 30303, USA.
Sibo Jiang
Julianne Caton-Williams
Hehua Liu
Zhen Huang
Georgia State University · US

Funding

Selenium-Derivatized RNAs and DNAs for High-Throughput Protein/Nucleic Acid CrystR01GM095881 · NIGMS · GEORGIA STATE UNIVERSITY · PI HUANG, ZHEN · 2012 to 2016
$1.4M
NIGMS NIH HHS R01 GM095881NIGMS NIH HHS R01GM095881
6 · The paper itself

Abstract

2-Selenouridine ((Se)U) is one of the naturally occurring modifications of Se-tRNAs ((Se)U-RNA) at the wobble position of the anticodon loop. Its role in the RNA-RNA interaction, especially during the mRNA decoding, is elusive. To assist the research exploration, herein we report the enzymatic synthesis of the (Se)U-RNA via 2-selenouridine triphosphate ((Se)UTP) synthesis and RNA transcription. Moreover, we have demonstrated that the synthesized (Se)UTP is stable and recognizable by T7 RNA polymerase. Under the optimized conditions, the transcription yield of (Se)U-RNA can reach up to 85% of the corresponding native RNA. Furthermore, the transcribed (Se)U-hammerhead ribozyme has the similar activity as the corresponding native, which suggests usefulness of (Se)U-RNAs in function and structure studies of noncoding RNAs, including the Se-tRNAs.

Indexed as

Transcription, GeneticAnticodonCatalysisDNA-Directed RNA PolymerasesModels, MolecularNucleic Acid ConformationOrganoselenium CompoundsRNARNA, CatalyticRNA, MessengerUridine TriphosphateViral ProteinsAnticodonbacteriophage T7 RNA polymeraseDNA-Directed RNA Polymeraseshammerhead ribozymeOrganoselenium CompoundsRNARNA, CatalyticRNA, MessengerUridine TriphosphateViral Proteins2-selenouridine triphosphatehammerhead ribozymeRNA crystallographyRNA structure and functionRNA transcription

Identifiers

PMID23887148
PMCPMC3753936
OpenAlexW2165785613

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.