Evidence map›Paper›PMID 23884601›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2013

Large deletions in the CBF gene cluster at the Fr-B2 locus are associated with reduced frost tolerance in wheat.

Stephen Pearce, Jie Zhu, Ákos Boldizsár, Attila Vágújfalvi, Adrienne Burke, Kimberley Garland-Campbell, Gábor Galiba, Jorge Dubcovsky

Abstract read
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Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

26 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. How Structural Variations Influence Crop Improvement.International journal of molecular sciences · 2025
    Review
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  6. Review
  7. TheCells · 2023
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  8. Review
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Copy number variation of CBF-A14 at the Fr-A2 locus determines frost tolerance in winter durum wheat.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2016
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Stephen PearceDepartment of Plant Sciences, University of California, Davis, CA, 95616, USA.
Jie Zhu
Ákos Boldizsár
Attila Vágújfalvi
Adrienne Burke
Kimberley Garland-Campbell
Gábor Galiba
Jorge Dubcovsky

Funding

Howard Hughes Medical Institute
6 · The paper itself

Abstract

Wheat plants which are exposed to periods of low temperatures (cold acclimation) exhibit increased survival rates when they are subsequently exposed to freezing temperatures. This process is associated with large-scale changes in the transcriptome which are modulated by a set of tandemly duplicated C-repeat Binding Factor (CBF) transcription factors located at the Frost Resistance-2 (Fr-2) locus. While Arabidopsis has three tandemly duplicated CBF genes, the CBF family in wheat has undergone an expansion and at least 15 CBF genes have been identified, 11 of which are present at the Fr-2 loci on homeologous group 5 chromosomes. We report here the discovery of three large deletions which eliminate 6, 9, and all 11 CBF genes from the Fr-B2 locus in tetraploid and hexaploid wheat. In wild emmer wheat, the Fr-B2 deletions were found only among the accessions from the southern sub-populations. Among cultivated wheats, the Fr-B2 deletions were more common among varieties with a spring growth habit than among those with a winter growth habit. Replicated freezing tolerance experiments showed that both the deletion of nine CBF genes in tetraploid wheat and the complete Fr-B2 deletion in hexaploid wheat were associated with significant reductions in survival after exposure to freezing temperatures. Our results suggest that selection for the wild-type Fr-B2 allele may be beneficial for breeders selecting for varieties with improved frost tolerance.

Indexed as

FreezingGene DeletionMultigene FamilyAdaptation, PhysiologicalChromosomes, PlantCrosses, GeneticGenes, PlantGenetic LociGeographyPlant ProteinsPolyploidySeasonsTranscriptomeTriticumPlant Proteins

Identifiers

PMID23884601
PMCPMC4779059

What OpenQuestion holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.