Evidence map›Paper›PMID 23884460›Full record

ArticleThe Journal of biological chemistry2013

Stress-induced condensation of bacterial genomes results in re-pairing of sister chromosomes: implications for double strand DNA break repair.

Nelia Shechter, Liron Zaltzman, Allon Weiner, Vlad Brumfeld, Eyal Shimoni, Yael Fridmann-Sirkis, Abraham Minsky

Abstract read
In one paragraph

Article in The Journal of biological chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. NFrontiers in microbiology · 2024
    Article
  6. Review
  7. Article
  8. How oxygen gave rise to eukaryotic sex.Proceedings. Biological sciences · 2018
    Review
  9. Article
  10. Article
  11. Article
  12. DNA double-strand break repair at--15{degrees}C.Applied and environmental microbiology · 2013
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Nelia ShechterFrom the Departments of Structural Biology and.
Liron ZaltzmanFrom the Departments of Structural Biology and.
Allon WeinerFrom the Departments of Structural Biology and.
Vlad BrumfeldChemical Research Support, The Weizmann Institute of Science, Rehovot 76100, Israel.
Eyal ShimoniChemical Research Support, The Weizmann Institute of Science, Rehovot 76100, Israel.
Yael Fridmann-SirkisFrom the Departments of Structural Biology and.
Abraham MinskyFrom the Departments of Structural Biology and. Electronic address: avi.minsky@weizmann.ac.il.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Genome condensation is increasingly recognized as a generic stress response in bacteria. To better understand the physiological implications of this response, we used fluorescent markers to locate specific sites on Escherichia coli chromosomes following exposure to cytotoxic stress. We find that stress-induced condensation proceeds through a nonrandom, zipper-like convergence of sister chromosomes, which is proposed to rely on the recently demonstrated intrinsic ability of identical double-stranded DNA molecules to specifically identify each other. We further show that this convergence culminates in spatial proximity of homologous sites throughout chromosome arms. We suggest that the resulting apposition of homologous sites can explain how repair of double strand DNA breaks might occur in a mechanism that is independent of the widely accepted yet physiologically improbable genome-wide search for homologous templates. We claim that by inducing genome condensation and orderly convergence of sister chromosomes, diverse stress conditions prime bacteria to effectively cope with severe DNA lesions such as double strand DNA breaks.

Indexed as

DNA Breaks, Double-StrandedChromosomes, BacterialDNA RepairEscherichia coliGenome, BacterialBiophysicsDNA DamageDNA Physical ChemistryDNA StructureEscherichia coliFluorescenceHomologous RecombinationRecAReplication Forks

Identifiers

PMID23884460
PMCPMC3757227

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.