Evidence map›Paper›PMID 23884442›Full record

ArticleDevelopment (Cambridge, England)2013

A non-canonical role for the C. elegans dosage compensation complex in growth and metabolic regulation downstream of TOR complex 2.

Christopher M Webster, Lianfeng Wu, Denzil Douglas, Alexander A Soukas

Open access · hybridAbstract read
In one paragraph

Article in Development (Cambridge, England), 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
0.6field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 24 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Application ofInternational journal of molecular sciences · 2023
    Review
  5. The AncestralG3 (Bethesda, Md.) · 2020
    Article
  6. TOR Signaling inGenetics · 2019
    Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Balancing up and downregulation of the C. elegans X chromosomes.Current opinion in genetics & development · 2015
    Review
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Christopher M WebsterCenter for Human Genetic Research and Diabetes Unit, Department of Medicine, Massachusetts General Hospital, Boston, MA 02114, USA.
Lianfeng Wu
Denzil Douglas
Alexander A Soukas
Harvard University · US

Funding

Enhancing and expanding the CGC Strain CollectionP40OD010440 · OD · UNIVERSITY OF MINNESOTA · PI Aric L Daul, Ann E. Rougvie · 2012 to 2026
$7.5M
Epigenetic regulation of metabolism by target of rapamycin complex 2R01DK101522 · NIDDK · MASSACHUSETTS GENERAL HOSPITAL · PI SOUKAS, ALEXANDER A · 2014 to 2018
$1.9M
Obesity and diabetes genetics in Caenorhabditis elegans.K08DK087941 · NIDDK · MASSACHUSETTS GENERAL HOSPITAL · PI SOUKAS, ALEXANDER A · 2010 to 2014
$801k
NIDDK NIH HHS K08 DK087941NIDDK NIH HHS K08DK087941NIDDK NIH HHS R01 DK101522NIH HHS P40 OD010440
6 · The paper itself

Abstract

The target of rapamycin complex 2 (TORC2) pathway is evolutionarily conserved and regulates cellular energetics, growth and metabolism. Loss of function of the essential TORC2 subunit Rictor (RICT-1) in Caenorhabditis elegans results in slow developmental rate, reduced brood size, small body size, increased fat mass and truncated lifespan. We performed a rict-1 suppressor RNAi screen of genes encoding proteins that possess the phosphorylation sequence of the AGC family kinase SGK, a key downstream effector of TORC2. Only RNAi to dpy-21 suppressed rict-1 slow developmental rate. DPY-21 functions canonically in the ten-protein dosage compensation complex (DCC) to downregulate the expression of X-linked genes only in hermaphroditic worms. However, we find that dpy-21 functions outside of its canonical role, as RNAi to dpy-21 suppresses TORC2 mutant developmental delay in rict-1 males and hermaphrodites. RNAi to dpy-21 normalized brood size and fat storage phenotypes in rict-1 mutants, but failed to restore normal body size and normal lifespan. Further dissection of the DCC via RNAi revealed that other complex members phenocopy the dpy-21 suppression of rict-1, as did RNAi to the DCC effectors set-1 and set-4, which methylate histone 4 on lysine 20 (H4K20). TORC2/rict-1 animals show dysregulation of H4K20 mono- and tri-methyl silencing epigenetic marks, evidence of altered DCC, SET-1 and SET-4 activity. DPY-21 protein physically interacts with the protein kinase SGK-1, suggesting that TORC2 directly regulates the DCC. Together, the data suggest non-canonical, negative regulation of growth and reproduction by DPY-21 via DCC, SET-1 and SET-4 downstream of TORC2 in C. elegans.

Indexed as

Adaptor Proteins, Signal TransducingAnimalsBlotting, WesternBody SizeCaenorhabditis elegansCaenorhabditis elegans ProteinsCarrier ProteinsClutch SizeDNA PrimersDosage Compensation, GeneticEnergy MetabolismEpigenesis, GeneticFemaleHistone-Lysine N-MethyltransferaseLongevityMaleAdaptor Proteins, Signal TransducingCaenorhabditis elegans ProteinsCarrier ProteinsDNA PrimersDPY-21 protein, C elegansHistone-Lysine N-MethyltransferaseMechanistic Target of Rapamycin Complex 2MethyltransferasesMultiprotein ComplexesProtein Serine-Threonine KinasesRapamycin-Insensitive Companion of mTOR Proteinrict-1 protein, C elegansSet-1 protein, C elegansSET-4 protein, C elegansSgk-1 protein, C elegansTOR Serine-Threonine KinasesAgingC. elegansDosage compensation complex (DCC)dpy-21EpigeneticsGrowthMetabolismRictorTarget of rapamycin (TOR)TOR complex 2 (TORC2)

Identifiers

PMID23884442
PMCPMC3742143
OpenAlexW2009484058

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.