Evidence map›Paper›PMID 23883094›Full record

ArticleBioscience reports2013

Androgen response element of the glycine N-methyltransferase gene is located in the coding region of its first exon.

Cheng-Ming Lee, Chia-Hung Yen, Tsai-Yu Tzeng, Yu-Zen Huang, Kuan-Hsien Chou, Tai-Jay Chang, Yi-Ming Arthur Chen

Open access · goldAbstract read
In one paragraph

Article in Bioscience reports, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 17 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Cheng-Ming Lee*AIDS Prevention and Research Center, National Yang-Ming University, Taipei, Taiwan 11221.
Chia-Hung Yen
Tsai-Yu Tzeng§VYM Genome Research Center, National Yang-Ming University, Taipei, Taiwan 11221.
Yu-Zen Huang*AIDS Prevention and Research Center, National Yang-Ming University, Taipei, Taiwan 11221.
Kuan-Hsien Chou§VYM Genome Research Center, National Yang-Ming University, Taipei, Taiwan 11221.
Tai-Jay Chang
Yi-Ming Arthur Chen
National Yang Ming Chiao Tung University · TWKaohsiung Medical University · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Androgen plays an important role in the pathogenesis of PCa (prostate cancer). Previously, we identified GNMT (glycine N-methyltransferase) as a tumour susceptibility gene and characterized its promoter region. Besides, its enzymatic product-sarcosine has been recognized as a marker for prognosis of PCa. The goals of this study were to determine whether GNMT is regulated by androgen and to map its AREs (androgen response elements). Real-time PCR analyses showed that R1881, a synthetic AR (androgen receptor) agonist induced GNMT expression in AR-positive LNCaP cells, but not in AR-negative DU145 cells. In silico prediction showed that there are four putative AREs in GNMT-ARE1, ARE2 and ARE3 are located in the intron 1 and ARE4 is in the intron 2. Consensus ARE motif deduced from published AREs was used to identify the fifth ARE-ARE5 in the coding region of exon 1. Luciferase reporter assay found that only ARE5 mediated the transcriptional activation of R1881. ARE3 overlaps with a YY1 [Yin and Yang 1 (motif (CaCCATGTT, +1118/+1126)] that was further confirmed by antibody supershift and ChIP (chromatin immunoprecipitation) assays. EMSA (electrophoretic mobility shift assay) and ChIP assay confirmed that AR interacts with ARE5 in vitro and in vivo. In summary, GNMT is an AR-targeted gene with its functional ARE located at +19/+33 of the first exon. These results are valuable for the study of the influence of androgen on the gene expression of GNMT especially in the pathogenesis of cancer.

Indexed as

Gene Expression Regulation, NeoplasticResponse ElementsAndrogen Receptor AntagonistsAnilidesBase SequenceBinding SitesCell Line, TumorExonsGlycine N-MethyltransferaseHumansMaleMetriboloneNitrilesOpen Reading FramesProstatic NeoplasmsProtein BindingAndrogen Receptor AntagonistsAnilidesbicalutamideGlycine N-MethyltransferaseGNMT protein, humanMetriboloneNitrilesReceptors, AndrogenTestosterone CongenersTosyl Compounds

Identifiers

PMID23883094
PMCPMC3775523
OpenAlexW2087974081

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.