Evidence map›Paper›PMID 23882074›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2013

Single-particle analysis reveals shutoff control of the Arabidopsis ammonium transporter AMT1;3 by clustering and internalization.

Qinli Wang, Yuanyuan Zhao, Wangxi Luo, Ruili Li, Qihua He, Xiaohong Fang, Roberto De Michele, Cindy Ast, Nicolaus von Wirén, Jinxing Lin

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
11.6field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 102 citations in OpenAlex.

  1. Review
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  13. Single-Molecule Imaging in Living Plant Cells: A Methodological Review.International journal of molecular sciences · 2021
    Review
  14. Article
  15. Review
  16. Article
  17. Function and Regulation of Ammonium Transporters in Plants.International journal of molecular sciences · 2020
    Review
  18. Review
  19. Dynamics and Endocytosis of Flot1 inInternational journal of molecular sciences · 2020
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 7 institutions in 4 countries.

Qinli WangKey Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China.
Yuanyuan Zhao
Wangxi Luo
Ruili Li
Qihua He
Xiaohong Fang
Roberto De Michele
Cindy Ast
Nicolaus von Wirén
Jinxing Lin
Chinese Academy of Sciences · CNInstitute of Botany · CNCarnegie Institution for Science · USInstitute of Chemistry · CNLeibniz Association · DENational Research Council · ITPeking University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ammonium is a preferred source of nitrogen for plants but is toxic at high levels. Plant ammonium transporters (AMTs) play an essential role in NH4(+) uptake, but the mechanism by which AMTs are regulated remains unclear. To study how AMTs are regulated in the presence of ammonium, we used variable-angle total internal reflection fluorescence microscopy and fluorescence cross-correlation spectroscopy for single-particle fluorescence imaging of EGFP-tagged AMT1;3 on the plasma membrane of Arabidopsis root cells at various ammonium levels. We demonstrated that AMT1;3-EGFP dynamically appeared and disappeared on the plasma membrane as moving fluorescent spots in low oligomeric states under N-deprived and N-sufficient conditions. Under external high-ammonium stress, however, AMT1;3-EGFPs were found to amass into clusters, which were then internalized into the cytoplasm. A similar phenomenon also occurred in the glutamine synthetase mutant gln1;2 background. Single-particle analysis of AMT1;3-EGFPs in the clathrin heavy chain 2 mutant (chc2 mutant) and Flotllin1 artificial microRNA (Flot1 amiRNA) backgrounds, together with chemical inhibitor treatments, demonstrated that the endocytosis of AMT1;3 clusters induced by high-ammonium stress could occur mainly through clathrin-mediated endocytic pathways, but the contribution of microdomain-associated endocytic pathway cannot be excluded in the internalization. Our results revealed that the clustering and endocytosis of AMT1;3 provides an effective mechanism by which plant cells can avoid accumulation of toxic levels of ammonium by eliminating active AMT1;3 from the plasma membrane.

Indexed as

EndocytosisArabidopsisArabidopsis ProteinsBlotting, WesternCation Transport ProteinsCell MembraneClathrin Heavy ChainsCytoplasmGreen Fluorescent ProteinsMicroscopy, ConfocalMicroscopy, FluorescenceMicroscopy, VideoMutationPlants, Genetically ModifiedProtein MultimerizationQuaternary Ammonium CompoundsArabidopsis ProteinsCation Transport ProteinsClathrin Heavy ChainsGreen Fluorescent ProteinsQuaternary Ammonium CompoundsRecombinant Fusion ProteinsFCSVA-TIRFM

Identifiers

PMID23882074
PMCPMC3740831
OpenAlexW1990269268

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.