Evidence map›Paper›PMID 23880767›Full record

ArticleThe Journal of biological chemistry2013

β-Glucosidase 2 (GBA2) activity and imino sugar pharmacology.

Christina M Ridley, Karen E Thur, Jessica Shanahan, Nagendra Babu Thillaiappan, Ann Shen, Karly Uhl, Charlotte M Walden, Ahad A Rahim, Simon N Waddington, Frances M Platt and 1 more

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed, 1 pooled it
4.2field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 1 synthesis or guideline pooled it, 80 citations in OpenAlex.

  1. Pooled it
  2. Trial
  3. Trial
  4. Review
  5. Article
  6. Article
  7. Article
  8. Review
  9. Review
  10. Review
  11. Severe neurometabolic phenotype inFrontiers in molecular neuroscience · 2023
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. TheThe Journal of biological chemistry · 2020
    Article
  17. Article
  18. International journal of molecular sciences · 2019
    Article
  19. Article
  20. Substrate reduction therapy for inborn errors of metabolism.Emerging topics in life sciences · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

Christina M RidleyFrom the Atlantic Research Centre, Departments of Pediatrics and Biochemistry and Molecular Biology, Dalhousie University, Halifax, Nova Scotia B3H 4R2, Canada.
Karen E ThurFrom the Atlantic Research Centre, Departments of Pediatrics and Biochemistry and Molecular Biology, Dalhousie University, Halifax, Nova Scotia B3H 4R2, Canada.
Jessica ShanahanFrom the Atlantic Research Centre, Departments of Pediatrics and Biochemistry and Molecular Biology, Dalhousie University, Halifax, Nova Scotia B3H 4R2, Canada.
Nagendra Babu Thillaiappanthe Department of Pharmacology, University of Oxford, Oxford OX1 3QT, United Kingdom.
Ann ShenFrom the Atlantic Research Centre, Departments of Pediatrics and Biochemistry and Molecular Biology, Dalhousie University, Halifax, Nova Scotia B3H 4R2, Canada.
Karly UhlFrom the Atlantic Research Centre, Departments of Pediatrics and Biochemistry and Molecular Biology, Dalhousie University, Halifax, Nova Scotia B3H 4R2, Canada.
Charlotte M Waldenthe Department of Biochemistry, University of Oxford, Oxford OX1 3QU, United Kingdom, and.
Ahad A Rahimthe Gene Transfer Technology Group, Institute of Women's Health, University College London, London WC1E 6HX, United Kingdom.
Simon N Waddingtonthe Gene Transfer Technology Group, Institute of Women's Health, University College London, London WC1E 6HX, United Kingdom.
Frances M Plattthe Department of Pharmacology, University of Oxford, Oxford OX1 3QT, United Kingdom.
Aarnoud C van der SpoelFrom the Atlantic Research Centre, Departments of Pediatrics and Biochemistry and Molecular Biology, Dalhousie University, Halifax, Nova Scotia B3H 4R2, Canada,. Electronic address: spoela@dal.ca.
Dalhousie University · CAUniversity of Oxford · GBUniversity College London · GB

Funding

Glycosphingolipids as targets for male contraceptionU01HD045861 · NICHD · UNIVERSITY OF OXFORD · PI PLATT, FRANCES MARY · 2004 to 2008
$841k
Medical Research Council G1000709NICHD NIH HHS U01 HD045861NICHD NIH HHS U01 HD45861
6 · The paper itself

Abstract

β-Glucosidase 2 (GBA2) is an enzyme that cleaves the membrane lipid glucosylceramide into glucose and ceramide. The GBA2 gene is mutated in genetic neurological diseases (hereditary spastic paraplegia and cerebellar ataxia). Pharmacologically, GBA2 is reversibly inhibited by alkylated imino sugars that are in clinical use or are being developed for this purpose. We have addressed the ambiguity surrounding one of the defining characteristics of GBA2, which is its sensitivity to inhibition by conduritol B epoxide (CBE). We found that CBE inhibited GBA2, in vitro and in live cells, in a time-dependent fashion, which is typical for mechanism-based enzyme inactivators. Compared with the well characterized impact of CBE on the lysosomal glucosylceramide-degrading enzyme (glucocerebrosidase, GBA), CBE inactivated GBA2 less efficiently, due to a lower affinity for this enzyme (higher KI) and a lower rate of enzyme inactivation (k(inact)). In contrast to CBE, N-butyldeoxygalactonojirimycin exclusively inhibited GBA2. Accordingly, we propose to redefine GBA2 activity as the β-glucosidase that is sensitive to inhibition by N-butyldeoxygalactonojirimycin. Revised as such, GBA2 activity 1) was optimal at pH 5.5-6.0; 2) accounted for a much higher proportion of detergent-independent membrane-associated β-glucosidase activity; 3) was more variable among mouse tissues and neuroblastoma and monocyte cell lines; and 4) was more sensitive to inhibition by N-butyldeoxynojirimycin (miglustat, Zavesca®), in comparison with earlier studies. Our evaluation of GBA2 makes it possible to assess its activity more accurately, which will be helpful in analyzing its physiological roles and involvement in disease and in the pharmacological profiling of monosaccharide mimetics.

Indexed as

1-DeoxynojirimycinAnimalsbeta-GlucosidaseCell Line, TumorCerebellar AtaxiaChlorocebus aethiopsCOS CellsEnzyme InhibitorsGlucosylceramidaseHumansHydrogen-Ion ConcentrationInositolMiceSpastic Paraplegia, Hereditary1-Deoxynojirimycinbeta-Glucosidasebeta-glucosidase 2, mouseconduritol epoxideEnzyme InhibitorsGBA2 protein, humanGlucosylceramidaseInositolmigalastatConduritol B EpoxideEnzyme InhibitorsGlucosylceramideGlycolipidsGlycoside HydrolasesMechanism-based Enzyme InhibitorMembrane LipidsMiglustatNonlysosomal GlucosylceramidaseSphingolipid

Identifiers

PMID23880767
PMCPMC3764809
OpenAlexW1972455024

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.