Evidence map›Paper›PMID 23878505›Full record

ArticleMolecular vision2013

Novel mutations in RPE65 identified in consanguineous Pakistani families with retinal dystrophy.

Firoz Kabir, Shagufta Naz, S Amer Riazuddin, Muhammad Asif Naeem, Shaheen N Khan, Tayyab Husnain, Javed Akram, Paul A Sieving, J Fielding Hejtmancik, Sheikh Riazuddin

Open access · greenAbstract read
In one paragraph

Article in Molecular vision, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact, top 90% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
  3. Long-Term Follow-Up of Retinal Degenerations Associated WithTranslational vision science & technology · 2019
    Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Firoz KabirNational Centre of Excellence in Molecular Biology, University of the Punjab, Lahore, Pakistan.
Shagufta Naz
S Amer Riazuddin
Muhammad Asif Naeem
Shaheen N Khan
Tayyab Husnain
Javed Akram
Paul A Sieving
J Fielding Hejtmancik
Sheikh Riazuddin
University of the Punjab · PK

Funding

Inherited Ocular DiseasesZIAEY000272 · NEI · NATIONAL EYE INSTITUTE · PI HEJTMANCIK, JAMES F. · 2009 to 2025
$27.0M
Preclinical and Clinical Study of CNGb3 Acromatopsia and Treatment with CNTFZIADC000083 · NIDCD · NATIONAL INSTITUTE ON DEAFNESS AND OTHER COMMUNICATION DISORDERS · PI SIEVING, PAUL · 2012 to 2015
$3.2M
6 · The paper itself

Abstract

purposeTo identify pathogenic mutations responsible for retinal dystrophy in three consanguineous Pakistani families.

methodsA thorough ophthalmic examination including fundus examination and electroretinography was performed, and blood samples were collected from all participating members. Genomic DNA was extracted, and genome-wide linkage and/or exclusion analyses were completed with fluorescently labeled short tandem repeat microsatellite markers. Two-point Lod scores were calculated, and coding exons along with exon-intron boundaries of RPE65 gene were sequenced, bidirectionally.

resultsOphthalmic examinations of the patients affected in all three families suggested retinal dystrophy with an early, most probably congenital, onset. Genome-wide linkage and/or exclusion analyses localized the critical interval in all three families to chromosome 1p31 harboring RPE65. Bidirectional sequencing of RPE65 identified a splice acceptor site variation in intron 2: c.95-1G>A, a single base substitution in exon 3: c.179T>C, and a single base deletion in exon 5: c.361delT in the three families, respectively. All three variations segregated with the disease phenotype in their respective families and were absent from ethnically matched control chromosomes.

conclusionsThese results strongly suggest that causal mutations in RPE65 are responsible for retinal dystrophy in the affected individuals of these consanguineous Pakistani families.

Indexed as

ConsanguinityAmino Acid SequenceBase SequenceChromosomes, Human, Pair 1cis-trans-IsomerasesConserved SequenceDNA Mutational AnalysisElectroretinographyFamilyFemaleFundus OculiGenetic Predisposition to DiseaseHaplotypesHumansLod ScoreMalecis-trans-IsomerasesRetinoid Isomerohydrolase

Identifiers

PMID23878505
PMCPMC3716412
OpenAlexW2097505792

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.