Evidence map›Paper›PMID 23878275›Full record

ArticleThe Journal of cell biology2013

Chromatin insulator bodies are nuclear structures that form in response to osmotic stress and cell death.

Todd Schoborg, Ryan Rickels, Josh Barrios, Mariano Labrador

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of cell biology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 45 citations in OpenAlex.

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  18. The zinc-finger protein CLAMP promotesJournal of cell science · 2019
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Todd SchoborgDepartment of Biochemistry and Cellular and Molecular Biology, University of Tennessee, Knoxville, TN 37996, USA.
Ryan Rickels
Josh Barrios
Mariano Labrador
University of Tennessee at Knoxville · US

Funding

Drosophila Transgenic RNAi Resource ProjectR01GM084947 · NIGMS · HARVARD MEDICAL SCHOOL · PI PERRIMON, NORBERT · 2008 to 2019
$9.8M
Molecular basis of transvectionR21GM078132 · NIGMS · UNIVERSITY OF TENNESSEE KNOXVILLE · PI LABRADOR-SAN JOSE, MARIANO · 2006 to 2007
$390k
NIGMS NIH HHS GM78132-2NIGMS NIH HHS R01 GM084947NIGMS NIH HHS R21 GM078132
6 · The paper itself

Abstract

Chromatin insulators assist in the formation of higher-order chromatin structures by mediating long-range contacts between distant genomic sites. It has been suggested that insulators accomplish this task by forming dense nuclear foci termed insulator bodies that result from the coalescence of multiple protein-bound insulators. However, these structures remain poorly understood, particularly the mechanisms triggering body formation and their role in nuclear function. In this paper, we show that insulator proteins undergo a dramatic and dynamic spatial reorganization into insulator bodies during osmostress and cell death in a high osmolarity glycerol-p38 mitogen-activated protein kinase-independent manner, leading to a large reduction in DNA-bound insulator proteins that rapidly repopulate chromatin as the bodies disassemble upon return to isotonicity. These bodies occupy distinct nuclear territories and contain a defined structural arrangement of insulator proteins. Our findings suggest insulator bodies are novel nuclear stress foci that can be used as a proxy to monitor the chromatin-bound state of insulator proteins and provide new insights into the effects of osmostress on nuclear and genome organization.

Indexed as

Insulator ElementsOsmosisAnimalsCell DeathCell LineCell NucleolusCell NucleusChromatinCulture MediaDrosophilaDrosophila ProteinsGlycerolLarvaMitogen-Activated Protein Kinase 14Osmolar ConcentrationSodium ChlorideChromatinCulture MediaDrosophila ProteinsGlycerolMitogen-Activated Protein Kinase 14Sodium Chloride

Identifiers

PMID23878275
PMCPMC3718971
OpenAlexW2111755207

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.