Evidence map›Paper›PMID 23877697›Full record

ArticleAntimicrobial agents and chemotherapy2013

Cyclic AMP effectors in African trypanosomes revealed by genome-scale RNA interference library screening for resistance to the phosphodiesterase inhibitor CpdA.

Matthew K Gould, Sabine Bachmaier, Juma A M Ali, Sam Alsford, Daniel N A Tagoe, Jane C Munday, Achim C Schnaufer, David Horn, Michael Boshart, Harry P de Koning

Open access · hybridAbstract read
In one paragraph

Article in Antimicrobial agents and chemotherapy, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed
3.7field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 69 citations in OpenAlex.

  1. Genetic Manipulation of Paradiplonema papillatum.Methods in molecular biology (Clifton, N.J.) · 2026
    Article
  2. Axonemal dynein contributions to flagellar beat types and waveforms.bioRxiv : the preprint server for biology · 2025
    Article
  3. Review
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  7. Adhesion ofmSphere · 2024
    Article
  8. Article
  9. Article
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  11. Review
  12. Cell-cell communication in African trypanosomes.Microbiology (Reading, England) · 2023
    Review
  13. Article
  14. Article
  15. Article
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  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 2 countries.

Matthew K GouldInstitute of Infection, Immunity & Inflammation, College of Medical, Veterinary & Life Sciences, University of Glasgow, Glasgow, United Kingdom.
Sabine Bachmaier
Juma A M Ali
Sam Alsford
Daniel N A Tagoe
Jane C Munday
Achim C Schnaufer
David Horn
Michael Boshart
Harry P de Koning
University of Glasgow · GBLondon School of Hygiene & Tropical Medicine · GBLudwig-Maximilians-Universität München · DEUniversity of Edinburgh · GBWellcome Centre for Molecular Parasitology · GB

Funding

Medical Research Council G0600129Medical Research Council G0701258Wellcome Trust 085349Wellcome Trust 093010/Z/10/ZWellcome Trust 095831
6 · The paper itself

Abstract

One of the most promising new targets for trypanocidal drugs to emerge in recent years is the cyclic AMP (cAMP) phosphodiesterase (PDE) activity encoded by TbrPDEB1 and TbrPDEB2. These genes were genetically confirmed as essential, and a high-affinity inhibitor, CpdA, displays potent antitrypanosomal activity. To identify effectors of the elevated cAMP levels resulting from CpdA action and, consequently, potential sites for adaptations giving resistance to PDE inhibitors, resistance to the drug was induced. Selection of mutagenized trypanosomes resulted in resistance to CpdA as well as cross-resistance to membrane-permeable cAMP analogues but not to currently used trypanocidal drugs. Resistance was not due to changes in cAMP levels or in PDEB genes. A second approach, a genome-wide RNA interference (RNAi) library screen, returned four genes giving resistance to CpdA upon knockdown. Validation by independent RNAi strategies confirmed resistance to CpdA and suggested a role for the identified cAMP Response Proteins (CARPs) in cAMP action. CARP1 is unique to kinetoplastid parasites and has predicted cyclic nucleotide binding-like domains, and RNAi repression resulted in >100-fold resistance. CARP2 and CARP4 are hypothetical conserved proteins associated with the eukaryotic flagellar proteome or with flagellar function, with an orthologue of CARP4 implicated in human disease. CARP3 is a hypothetical protein, unique to Trypanosoma. CARP1 to CARP4 likely represent components of a novel cAMP signaling pathway in the parasite. As cAMP metabolism is validated as a drug target in Trypanosoma brucei, cAMP effectors highly divergent from the mammalian host, such as CARP1, lend themselves to further pharmacological development.

Indexed as

Blotting, WesternCyclic AMPPhosphodiesterase InhibitorsPolymerase Chain ReactionProtozoan ProteinsRNA InterferenceTrypanocidal AgentsTrypanosoma brucei bruceiCyclic AMPPhosphodiesterase InhibitorsProtozoan ProteinsTrypanocidal Agents

Identifiers

PMID23877697
PMCPMC3811416
OpenAlexW2052064470

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.