Evidence map›Paper›PMID 23876292›Full record

ArticleMolecular phylogenetics and evolution2013

Integrative species delimitation in photosynthetic sea slugs reveals twenty candidate species in three nominal taxa studied for drug discovery, plastid symbiosis or biological control.

Patrick J Krug, Jann E Vendetti, Albert K Rodriguez, Jennifer N Retana, Yayoi M Hirano, Cynthia D Trowbridge

Open access · greenAbstract read
In one paragraph

Article in Molecular phylogenetics and evolution, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
9.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 88 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Taxonomic review ofZooKeys · 2023
    Article
  5. Article
  6. Recent advances and limitations in the application of kahalalides for the control of cancer.Biomedicine & pharmacotherapy = Biomedecine & pharmacotherapie · 2022
    Review
  7. Article
  8. Article
  9. Article
  10. Article
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  13. Article
  14. Molecular and morphological systematics ofZoological journal of the Linnean Society · 2018
    Article
  15. Article
  16. Population Dynamics of the Sea SlugZoological studies · 2016
    Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Patrick J KrugDepartment of Biological Sciences, California State University, Los Angeles, CA 90032-8201, USA. Electronic address: pkrug@calstatela.edu.
Jann E Vendetti
Albert K Rodriguez
Jennifer N Retana
Yayoi M Hirano
Cynthia D Trowbridge
California State University Los Angeles · USChiba University · JPUniversity of Oregon · US

Funding

Research Initiative for Scientific Enhancement (RISE)R25GM061331 · NIGMS · CALIFORNIA STATE UNIVERSITY LOS ANGELES · PI FOSTER, KRISHNA L · 2000 to 2021
$33.1M
NIGMS NIH HHS GM 61331NIGMS NIH HHS R25 GM061331
6 · The paper itself

Abstract

DNA barcoding can highlight taxa in which conventional taxonomy underestimates species richness, identifying mitochondrial lineages that may correspond to unrecognized species. However, key assumptions of barcoding remain untested for many groups of soft-bodied marine invertebrates with poorly resolved taxonomy. Here, we applied an integrative approach for species delimitation to herbivorous sea slugs in clade Sacoglossa, in which unrecognized diversity may complicate studies of drug discovery, plastid endosymbiosis, and biological control. Using the mitochondrial barcoding COI gene and the nuclear histone 3 gene, we tested the hypothesis that three widely distributed "species" each comprised a complex of independently evolving lineages. Morphological and reproductive characters were then used to evaluate whether each lineage was distinguishable as a candidate species. The "circumtropical" Elysia ornata comprised a Caribbean species and four Indo-Pacific candidate species that are potential sources of kahalalides, anti-cancer compounds. The "monotypic" and highly photosynthetic Plakobranchus ocellatus, used for over 60 years to study chloroplast symbiosis, comprised 10 candidate species. Finally, six candidate species were distinguished in the Elysia tomentosa complex, including potential biological control agents for invasive green algae (Caulerpa spp.). We show that a candidate species approach developed for vertebrates effectively categorizes cryptic diversity in marine invertebrates, and that integrating threshold COI distances with non-molecular character data can delimit species even when common assumptions of DNA barcoding are violated.

Indexed as

Biological Control AgentsDrug DiscoveryPhotosynthesisPhylogenyAnimalsBayes TheoremCell NucleusChlorophytaChloroplastsDNA Barcoding, TaxonomicDNA, MitochondrialGastropodaGenes, MitochondrialHaplotypesModels, GeneticSequence Analysis, DNABiological Control AgentsDNA, MitochondrialBarcodingElysiaKahalalidePlakobranchusSacoglossaSpecies delimitation

Identifiers

PMID23876292
PMCPMC3788053
OpenAlexW2143340423

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.