Evidence map›Paper›PMID 23874961›Full record

ArticlePloS one2013

Characterization of the interaction between the cohesin subunits Rad21 and SA1/2.

Nenggang Zhang, Yunyun Jiang, Qilong Mao, Borries Demeler, Yizhi Jane Tao, Debananda Pati

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
2.0field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 47 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Role of chromosomal cohesion and separation in aneuploidy and tumorigenesis.Cellular and molecular life sciences : CMLS · 2024
    Review
  12. Article
  13. Review
  14. Review
  15. It's all in the numbers: Cohesin stoichiometry.Frontiers in molecular biosciences · 2022
    Review
  16. Review
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

6 authors at 4 institutions in 1 country.

Nenggang ZhangTexas Children' Cancer Center, Department of Pediatric Hematology/Oncology, Baylor College of Medicine, Houston, Texas, USA.
Yunyun Jiang
Qilong Mao
Borries Demeler
Yizhi Jane Tao
Debananda Pati
Baylor College of Medicine · USChildren's Cancer Center · USRice University · USThe University of Texas Health Science Center at San Antonio · US

Funding

UltraScan Software Maintenance and DevelopmentR01RR022200 · NCRR · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI DEMELER, BORRIES · 2007 to 2010
$1.7M
Molecular Basis of AneuploidyR01CA109330 · NCI · BAYLOR COLLEGE OF MEDICINE · PI PATI, DEBANANDA · 2006 to 2010
$1.6M
Mitotic Regulation of Apoptosis in LeukemiaR01CA109478 · NCI · BAYLOR COLLEGE OF MEDICINE · PI PATI, DEBANANDA · 2006 to 2010
$1.1M
NCI NIH HHS 1R01 CA109478NCI NIH HHS R01 CA109330NCRR NIH HHS R01 RR022200
6 · The paper itself

Abstract

The cohesin complex is responsible for the fidelity of chromosomal segregation during mitosis. It consists of four core subunits, namely Rad21/Mcd1/Scc1, Smc1, Smc3, and one of the yeast Scc3 orthologs SA1 or SA2. Sister chromatid cohesion is generated during DNA replication and maintained until the onset of anaphase. Among the many proposed models of the cohesin complex, the 'core' cohesin subunits Smc1, Smc3, and Rad21 are almost universally displayed as tripartite ring. However, other than its supportive role in the cohesin ring, little is known about the fourth core subunit SA1/SA2. To gain deeper insight into the function of SA1/SA2 in the cohesin complex, we have mapped the interactive regions of SA2 and Rad21 in vitro and ex vivo. Whereas SA2 interacts with Rad21 through a broad region (301-750 aa), Rad21 binds to SA proteins through two SA-binding motifs on Rad21, namely N-terminal (NT) and middle part (MP) SA-binding motif, located at 60-81 aa of the N-terminus and 383-392 aa of the MP of Rad21, respectively. The MP SA-binding motif is a 10 amino acid, α-helical motif. Deletion of these 10 amino acids or mutation of three conserved amino acids (L(385), F(389), and T(390)) in this α-helical motif significantly hinders Rad21 from physically interacting with SA1/2. Besides the MP SA-binding motif, the NT SA-binding motif is also important for SA1/2 interaction. Although mutations on both SA-binding motifs disrupt Rad21-SA1/2 interaction, they had no apparent effect on the Smc1-Smc3-Rad21 interaction. However, the Rad21-Rad21 dimerization was reduced by the mutations, indicating potential involvement of the two SA-binding motifs in the formation of the two-ring handcuff for chromosomal cohesion. Furthermore, mutant Rad21 proteins failed to significantly rescue precocious chromosome separation caused by depletion of endogenous Rad21 in mitotic cells, further indicating the physiological significance of the two SA-binding motifs of Rad21.

Indexed as

Amino Acid MotifsAmino Acid SequenceAnimalsAntigens, NuclearBinding SitesCell Cycle ProteinsChromatidsChromosomal Proteins, Non-HistoneCohesinsDNA-Binding ProteinsHumansImmunoprecipitationMolecular Sequence DataMutant ProteinsMutationNuclear ProteinsAntigens, NuclearCell Cycle ProteinsChromosomal Proteins, Non-HistoneCohesinsDNA-Binding ProteinsMutant ProteinsNuclear ProteinsPhosphoproteinsProtein SubunitsRAD21 protein, humanRecombinant ProteinsSTAG1 protein, humanSTAG2 protein, human

Identifiers

PMID23874961
PMCPMC3709894
OpenAlexW2139931508

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.