Evidence map›Paper›PMID 23874636›Full record

ArticlePloS one2013

Dual regulatory roles of human AP-endonuclease (APE1/Ref-1) in CDKN1A/p21 expression.

Shiladitya Sengupta, Sankar Mitra, Kishor K Bhakat

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.4field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 20 citations in OpenAlex.

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  16. Endothelial cell tumor growth is Ape/ref-1 dependent.American journal of physiology. Cell physiology · 2015
    Article
  17. Review
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Shiladitya SenguptaDepartment of Biochemistry and Molecular Biology, University of Texas Medical Branch, Galveston, Texas, United States of America.
Sankar Mitra
Kishor K Bhakat
The University of Texas Medical Branch at Galveston · US

Funding

STRUCTURE AND REGULATION OF DNA REPAIR GENES OF MAMMALSR01CA053791 · NCI · UNIVERSITY OF TEXAS MEDICAL BR GALVESTON · PI MITRA, SANKAR · 1991 to 2011
$4.0M
Regulatory Functions of APE1 - An Essential Repair ProteinR01ES008457 · NIEHS · UNIVERSITY OF TEXAS MEDICAL BR GALVESTON · PI MITRA, SANKAR · 1997 to 2010
$3.3M
Regulatory Functions of APE1 acetylationR01CA148941 · NCI · UNIVERSITY OF TEXAS MED BR GALVESTON · PI BHAKAT, KISHOR K · 2011 to 2015
$1.4M
NCI NIH HHS R01 CA053791NCI NIH HHS R01 CA148941NCI NIH HHS R01 CA53791NIEHS NIH HHS R01 ES008457NIEHS NIH HHS R01 ES08457
6 · The paper itself

Abstract

The human AP-endonuclease (APE1/Ref-1), an essential multifunctional protein involved in repair of oxidative DNA damage as well as in transcriptional regulation, is often overexpressed in tumor cells. APE1 was earlier shown to stimulate p53's DNA binding and its transactivation function in the expression of cyclin-dependent kinase inhibitor p21 (CDKN1A) gene. Here, we show APE1's stable binding to p53 cis elements which are required for p53-mediated activation of p21 in p53-expressing wild type HCT116 cells. However, surprisingly, we observed APE1-dependent repression of p21 in isogenic p53-null HCT116 cells. Ectopic expression of p53 in the p53-null cells abrogated this repression suggesting that APE1's negative regulatory role in p21 expression is dependent on the p53 status. We then identified APE1's another binding site in p21's proximal promoter region containing cis elements for AP4, a repressor of p21. Interestingly, APE1 and AP4 showed mutual dependence for p21 repression. Moreover, ectopic p53 in p53-null cells inhibited AP4's association with APE1, their binding to the promoter and p21 repression. These results together establish APE1's role as a co-activator or co-repressor of p21 gene, dependent on p53 status. It is thus likely that APE1 overexpression and inactivation of p53, often observed in tumor cells, promote tumor cell proliferation by constitutively downregulating p21 expression.

Indexed as

Binding SitesCyclin-Dependent Kinase Inhibitor p21DNA-(Apurinic or Apyrimidinic Site) LyaseHCT116 CellsHumansPromoter Regions, GeneticProtein BindingTumor Suppressor Protein p53APEX1 protein, humanCyclin-Dependent Kinase Inhibitor p21DNA-(Apurinic or Apyrimidinic Site) LyaseTumor Suppressor Protein p53

Identifiers

PMID23874636
PMCPMC3713036
OpenAlexW2059512188

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.