Evidence map›Paper›PMID 23873612›Full record

ArticleTransgenic research2013

Relative transgene expression frequencies in homozygous versus hemizygous transgenic mice.

Su-Ping Chang, Margaret L Opsahl, C Bruce A Whitelaw, Steven D Morley, John D West

Abstract read
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In one paragraph

Article in Transgenic research, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.2field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 5 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Su-Ping ChangGenes and Development Group, Centre for Integrative Physiology, School of Clinical Sciences, University of Edinburgh, Hugh Robson Building, George Square, Edinburgh, EH8 9XD, UK.
Margaret L Opsahl
C Bruce A Whitelaw
Steven D Morley
John D West
University of Edinburgh · GBPeter MacCallum Cancer Centre · AURoslin Institute · GB

Funding

Biotechnology and Biological Sciences Research Council BBS/E/D/05251442Biotechnology and Biological Sciences Research Council BBS/E/D/05251443Biotechnology and Biological Sciences Research Council BBS/E/D/05251444Biotechnology and Biological Sciences Research Council BBS/E/D/05251445Medical Research Council G1002033
6 · The paper itself

Abstract

We have used a simple binomial model of stochastic transgene inactivation at the level of the chromosome or transgene, rather than the cellular level, for the analysis of two mouse transgenic lines that show variegated patterns of expression. This predicts the percentages of cells that express one, both or neither alleles of the transgene in homozygotes from the observed percentages of cells, which express the transgene in hemizygotes. It adequately explained the relationship between the numbers of cells expressing the transgene in hemizygous and homozygous mosaic 21OH/LacZ mouse adrenals and mosaic BLG/7 mouse mammary glands. The binomial model also predicted that a small proportion of cells in mosaic mammary glands of BLG/7 homozygotes would express both BLG/7 alleles but published data indicated that all cells expressing the transgene showed monoallelic expression. Although it didn't fit all of the BLG/7 data as precisely as a more complex model, which used several ad hoc assumptions to explain these results, the simple binomial model was able to explain the relationship in observed transgene expression frequencies between hemizygous and homozygous mosaic tissues for both 21OH/LacZ and BLG/7 mice. It may prove to be a useful general model for analysing other transgenic animals showing mosaic transgene expression.

Indexed as

HemizygoteHomozygoteAdrenal CortexAllelesAnimalsChromosomal Position EffectsFemaleGene ExpressionLac OperonMaleMiceMice, TransgenicSteroid 21-HydroxylaseSteroid 21-Hydroxylase

Identifiers

PMID23873612
OpenAlexW2048652965

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.