Evidence map›Paper›PMID 23872636›Full record

ArticleNature genetics2013

DYX1C1 is required for axonemal dynein assembly and ciliary motility.

Aarti Tarkar, Niki T Loges, Christopher E Slagle, Richard Francis, Gerard W Dougherty, Joel V Tamayo, Brett Shook, Marie Cantino, Daniel Schwartz, Charlotte Jahnke and 37 more

Registry-linked trialOpen access · bronzeAbstract read
In one paragraph

Article in Nature genetics, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT00807482 (Diagnostic and Clinical Characterization of Patients With Unusual Genetic Disorders of the Airways), which is not on this map. Cited by 169 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
169citing papers in PubMed, 3 pooled it
14.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT00807482 recruitingnot on this map

Diagnostic and Clinical Characterization of Patients With Unusual Genetic Disorders of the Airways

TypeobservationalSponsorUniversity of North Carolina, Chapel HillRan2004 to 2027Enrolled1,800ConditionsKartagener Syndrome
3 · Its place in the literature

Who cites it

169 citing papers in PubMed, 3 syntheses or guidelines pooled it, 291 citations in OpenAlex.

  1. Pooled it
  2. Guideline
  3. Guideline
  4. DNAAF19-RUVBL1/2 complex recruits multiple adaptors to promote dynein arm assembly.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Article

109 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

47 authors at 10 institutions in 6 countries.

Aarti TarkarDepartment of Physiology and Neurobiology, University of Connecticut, Storrs, Connecticut, USA.
Niki T Loges
Christopher E Slagle
Richard Francis
Gerard W Dougherty
Joel V Tamayo
Brett Shook
Marie Cantino
Daniel Schwartz
Charlotte Jahnke
Heike Olbrich
Claudius Werner
Johanna Raidt
Petra Pennekamp
Marouan Abouhamed
Rim Hjeij
Gabriele Köhler
Matthias Griese
You Li
Kristi Lemke
Nikolas Klena
Xiaoqin Liu
George Gabriel
Kimimasa Tobita
Martine Jaspers
Lucy C Morgan
Adam J Shapiro
Stef J F Letteboer
Dorus A Mans
Johnny L Carson
Margaret W Leigh
Whitney E Wolf
Serafine Chen
Jane S Lucas
Alexandros Onoufriadis
Vincent PlagnolORCID 0000000255979215
Miriam Schmidts
Karsten Boldt
UK10K
Ronald Roepman
Maimoona A Zariwala
Cecilia W Lo
Hannah M Mitchison
Michael R Knowles
Rebecca D Burdine
Joseph J Loturco
Heymut Omran
University of Pittsburgh · USUniversity Hospital Münster · DEUniversity of Connecticut · USUniversity of North Carolina at Chapel Hill · USUniversity of North Carolina Health Care · USUniversity College London · GBNational Health Service · GBPrinceton University · USRadboud University Nijmegen · NLConcord Repatriation General Hospital · AU

Funding

Longitudinal Characterization of Respiratory Tract Exacerbations and Treatment Responses in Primary Ciliary DyskinesiaU54HL096458 · NHLBI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI DAVIS, STEPHANIE DUGGINS · 2009 to 2023
$20.0M
Integrated Training in Cancer Model SystemsT32CA009156 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI DER, CHANNING J. · 1985 to 2020
$19.7M
UNC Clinical and Translational Science AwardUL1TR000083 · NCATS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI RUNGE, MARSCHALL S. · 2012 to 2013
$11.6M
SYNAPTIC PHYSIOLOGY OF NEOCORTICAL ECTOPIASP01HD020806 · NICHD · BETH ISRAEL DEACONESS MEDICAL CENTER · PI GALABURDA, ALBERT MARK · 1986 to 2009
$8.8M
Modeling the genetic basis for human congenital heart disease in miceU01HL098180 · NHLBI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI LO, CECILIA W. · 2009 to 2014
$8.5M
Pathogenesis of PCD Lung DiseaseR01HL071798 · NHLBI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI KNOWLES, MICHAEL R · 2004 to 2021
$7.2M
PROJ 3: NEUROBEHAVIOR: BEHAVIOTAL CONSEQUENCES OF EMBRYONIC DISRUPTIONP01HD057853 · NICHD · BETH ISRAEL DEACONESS MEDICAL CENTER · PI LOTURCO, JOSEPH J · 2009 to 2014
$5.3M
Connecting Polycystin Signaling to Asymmetric Nodal ExpressionR01HD048584 · NICHD · PRINCETON UNIVERSITY · PI BURDINE, REBECCA D. · 2007 to 2016
$3.5M
MOLECULAR REGULATION OF NEOCORTICAL NEUROGENESISR01MH056524 · NIMH · UNIVERSITY OF CONNECTICUT STORRS · PI LOTURCO, JOSEPH J · 2003 to 2012
$3.3M
DYSLEXIA SUSCEPTIBILITY GENES AND MECHANISMS OF NEURONAL DEVELOPMENTR01HD055655 · NICHD · UNIVERSITY OF CONNECTICUT STORRS · PI LOTURCO, JOSEPH J · 2008 to 2012
$1.6M
NCATS NIH HHS UL1 TR000083NCI NIH HHS T32 CA009156NHLBI NIH HHS 5 R01HL071798NHLBI NIH HHS 5 U54 HL096458-06NHLBI NIH HHS R01 HL071798NHLBI NIH HHS U01 HL098180NHLBI NIH HHS U01HL098180NHLBI NIH HHS U54 HL096458NICHD NIH HHS 2 R01HD048584NICHD NIH HHS P01 HD020806NICHD NIH HHS P01 HD057853NICHD NIH HHS R01 HD048584NICHD NIH HHS R01 HD055655NIMH NIH HHS R01 MH056524Wellcome TrustWellcome Trust WT091310
6 · The paper itself

Abstract

DYX1C1 has been associated with dyslexia and neuronal migration in the developing neocortex. Unexpectedly, we found that deleting exons 2-4 of Dyx1c1 in mice caused a phenotype resembling primary ciliary dyskinesia (PCD), a disorder characterized by chronic airway disease, laterality defects and male infertility. This phenotype was confirmed independently in mice with a Dyx1c1 c.T2A start-codon mutation recovered from an N-ethyl-N-nitrosourea (ENU) mutagenesis screen. Morpholinos targeting dyx1c1 in zebrafish also caused laterality and ciliary motility defects. In humans, we identified recessive loss-of-function DYX1C1 mutations in 12 individuals with PCD. Ultrastructural and immunofluorescence analyses of DYX1C1-mutant motile cilia in mice and humans showed disruptions of outer and inner dynein arms (ODAs and IDAs, respectively). DYX1C1 localizes to the cytoplasm of respiratory epithelial cells, its interactome is enriched for molecular chaperones, and it interacts with the cytoplasmic ODA and IDA assembly factor DNAAF2 (KTU). Thus, we propose that DYX1C1 is a newly identified dynein axonemal assembly factor (DNAAF4).

Indexed as

AnimalsAxonemal DyneinsCiliaDisease Models, AnimalEpendymaGene Knockdown TechniquesGene OrderGene TargetingHumansIntracellular SpaceKartagener SyndromeMaleMiceMice, KnockoutMutationNerve Tissue ProteinsAxonemal DyneinsDYX1C1 protein, mouseNerve Tissue Proteins

Identifiers

PMID23872636
PMCPMC4000444
OpenAlexW1996212779

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.