Evidence map›Paper›PMID 23872037›Full record

ArticleUltramicroscopy2013

Minimizing electrostatic charging of an aperture used to produce in-focus phase contrast in the TEM.

Robert M Glaeser, Simone Sassolini, Rossana Cambie, Jian Jin, Stefano Cabrini, Andreas K Schmid, Radostin Danev, Bart Buijsse, Roseann Csencsits, Kenneth H Downing and 3 more

Abstract read
In one paragraph

Article in Ultramicroscopy, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Biological Applications at the Cutting Edge of Cryo-Electron Microscopy.Microscopy and microanalysis : the official journal of Microscopy Society of America, Microbeam Analysis Society, Microscopical Society of Canada · 2018
    Review
  2. Article
  3. Article
  4. Review
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Robert M GlaeserLife Sciences Division, Lawrence Berkeley National Laboratory, University of California, Berkeley, CA 94720, USA. Electronic address: rmglaeser@lbl.gov.
Simone Sassolini
Rossana Cambie
Jian Jin
Stefano Cabrini
Andreas K Schmid
Radostin Danev
Bart Buijsse
Roseann Csencsits
Kenneth H Downing
David M Larson
Dieter Typke
B G Han

Funding

TUBULIN STRUCTURE BY ELECTRON CRYSTALLOGRAPHYP01GM051487 · NIGMS · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI CATE, JAMIE H · 1994 to 2018
$27.6M
In-Focus Phase Contrast for Cryo-EMR01GM083039 · NIGMS · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI DOWNING, KENNETH H, GLAESER, ROBERT M · 2007 to 2014
$6.1M
NIGMS NIH HHS GM083039NIGMS NIH HHS P01 GM051487NIGMS NIH HHS R01 GM083039
6 · The paper itself

Abstract

Microfabricated devices designed to provide phase contrast in the transmission electron microscope must be free of phase distortions caused by unexpected electrostatic effects. We find that such phase distortions occur even when a device is heated to 300 °C during use in order to avoid the formation of polymerized, carbonaceous contamination. Remaining factors that could cause unwanted phase distortions include patchy variations in the work function of a clean metal surface, radiation-induced formation of a localized oxide layer, and creation of a contact potential between an irradiated area and the surround due to radiation-induced structural changes. We show that coating a microfabricated device with evaporated carbon apparently eliminates the problem of patchy variation in the work function. Furthermore, we show that a carbon-coated titanium device is superior to a carbon-coated gold device, with respect to radiation-induced electrostatic effects. A carbon-coated, hybrid double-sideband/single-sideband aperture is used to record in-focus, cryo-EM images of monolayer crystals of streptavidin. Images showing no systematic phase error due to charging are achievable under conditions of low-dose data collection. The contrast in such in-focus images is sufficient that one can readily see individual streptavidin tetramer molecules. Nevertheless, these carbon-coated devices perform well for only a limited length of time, and the cause of failure is not yet understood.

Indexed as

CarbonMicroscopy, Electron, TransmissionMicrotechnologyProtein ConformationStatic ElectricityStreptavidinCarbonStreptavidinChargingCryo-EMPhase contrastPhase plate

Identifiers

PMID23872037
PMCPMC3818313

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.