Evidence map›Paper›PMID 23871894›Full record

ArticleJournal of molecular biology2013

Dimer dynamics and filament organization of the bacterial cell division protein FtsA.

Jen Hsin, Rui Fu, Kerwyn Casey Huang

Open access · greenAbstract read
In one paragraph

Article in Journal of molecular biology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.9field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 2 countries.

Jen HsinDepartment of Bioengineering, Stanford University, Stanford, CA 94305, USA.
Rui Fu
Kerwyn Casey Huang
Stanford University · US

Funding

Engineering of cell shape and intracellular organizationDP2OD006466 · OD · STANFORD UNIVERSITY · PI HUANG, KERWYN C. · 2009 to 2009
$2.4M
Discovering mechanisms of bacterial cell division: From genotype to phenotypeF32GM100677 · NIGMS · STANFORD UNIVERSITY · PI HSIN, JEN · 2012 to 2014
$78k
NIGMS NIH HHS 1F32GM100677-01A1NIGMS NIH HHS F32 GM100677NIH HHS DP2 OD006466
6 · The paper itself

Abstract

FtsA is a bacterial actin homolog and one of the core proteins involved in cell division. While previous studies have demonstrated the capability of FtsA to polymerize, little is known about its polymerization state in vivo or if polymerization is necessary for FtsA function. Given that one function of FtsA is to tether FtsZ filaments to the membrane, in vivo polymerization of FtsA imposes geometric constraints and requires a specific polymer curvature direction. Here, we report a series of molecular dynamics simulations probing the structural dynamics of FtsA as a dimer and as a tetrameric single filament. We found that the FtsA polymer exhibits a preferred bending direction that would allow for its placement parallel with FtsZ polymers underneath the cytoplasmic membrane. We also identified key interfacial amino acids that mediate FtsA-FtsA interaction and propose that some amino acids play more critical roles than others. We performed in silico mutagenesis on FtsA and demonstrated that, while a moderate mutation at the polymerization interface does not significantly affect polymer properties such as bending direction and association strength, more drastic mutations change both features and could lead to non-functional FtsA.

Indexed as

Molecular Dynamics SimulationProtein MultimerizationBacterial ProteinsBinding SitesCell DivisionConserved SequenceCytoskeletal ProteinsModels, BiologicalMutationProtein BindingProtein ConformationBacterial ProteinsCytoskeletal ProteinsFtsA protein, BacteriaFtsZ protein, Bacteriaactin familybacterial cytoskeletoncell divisionmolecular dynamicspolymer mechanics

Identifiers

PMID23871894
PMCPMC3818905
OpenAlexW2051020472

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.