Evidence map›Paper›PMID 23871666›Full record

ArticleCell reports2013

NSun2-mediated cytosine-5 methylation of vault noncoding RNA determines its processing into regulatory small RNAs.

Shobbir Hussain, Abdulrahim A Sajini, Sandra Blanco, Sabine Dietmann, Patrick Lombard, Yoichiro Sugimoto, Maike Paramor, Joseph G Gleeson, Duncan T Odom, Jernej Ule and 1 more

Open access · goldAbstract read
In one paragraph

Article in Cell reports, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 355 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
355citing papers in PubMed, 1 pooled it
13.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

355 citing papers in PubMed, 1 synthesis or guideline pooled it, 599 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Biology and Therapeutic Potential of Exosomes, Targeted Drug Delivery.International journal of molecular sciences · 2026
    Review
  4. Ncl1-dependent mPlant communications · 2026
    Article
  5. Review
  6. Review
  7. Review
  8. How NSUN2 reshapes tRNA for mScience China. Life sciences · 2026
    Article
  9. Article
  10. Review
  11. Emerging roles of non-mNature plants · 2026
    Review
  12. Article
  13. mBiology direct · 2026
    Review
  14. Article
  15. Article
  16. Article
  17. Review
  18. Seven wonders of RNA modification biology.RNA (New York, N.Y.) · 2026
    Review
  19. Article
  20. Review

295 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 2 countries.

Shobbir HussainWellcome Trust - Medical Research Council Cambridge Stem Cell Institute, University of Cambridge, Tennis Court Road, Cambridge, CB2 1QR, UK.
Abdulrahim A Sajini
Sandra Blanco
Sabine Dietmann
Patrick Lombard
Yoichiro Sugimoto
Maike Paramor
Joseph G Gleeson
Duncan T Odom
Jernej Ule
Michaela Frye
Medical Research Council · GBUniversity of Cambridge · GBWellcome/MRC Cambridge Stem Cell Institute · GBUniversity College London · GBUniversity of California, San Diego · US

Funding

Cancer Research UK 15181Cancer Research UK 15603Cancer Research UK 16134Cancer Research UK A10185European Research Council 202218Medical Research Council MC_U105185858Wellcome Trust 079249Wellcome Trust 089701
6 · The paper itself

Abstract

Autosomal-recessive loss of the NSUN2 gene has been identified as a causative link to intellectual disability disorders in humans. NSun2 is an RNA methyltransferase modifying cytosine-5 in transfer RNAs (tRNAs), yet the identification of cytosine methylation in other RNA species has been hampered by the lack of sensitive and reliable molecular techniques. Here, we describe miCLIP as an additional approach for identifying RNA methylation sites in transcriptomes. miCLIP is a customized version of the individual-nucleotide-resolution crosslinking and immunoprecipitation (iCLIP) method. We confirm site-specific methylation in tRNAs and additional messenger and noncoding RNAs (ncRNAs). Among these, vault ncRNAs contained six NSun2-methylated cytosines, three of which were confirmed by RNA bisulfite sequencing. Using patient cells lacking the NSun2 protein, we further show that loss of cytosine-5 methylation in vault RNAs causes aberrant processing into Argonaute-associated small RNA fragments that can function as microRNAs. Thus, impaired processing of vault ncRNA may contribute to the etiology of NSun2-deficiency human disorders.

Indexed as

DNA MethylationAnimalsBase SequenceChlorocebus aethiopsCOS CellsCytosineHEK293 CellsHumansMethyltransferasesMolecular Sequence DataRNARNA, UntranslatedTranscriptomeTransfectionCytosineMethyltransferasesNSUN2 protein, humanRNARNA, Untranslated

Identifiers

PMID23871666
PMCPMC3730056
OpenAlexW2022268135

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.