Evidence map›Paper›PMID 23871208›Full record

ArticleImmunity2013

The autoimmunity-associated gene PTPN22 potentiates toll-like receptor-driven, type 1 interferon-dependent immunity.

Yaya Wang, Iftach Shaked, Stephanie M Stanford, Wenbo Zhou, Julie M Curtsinger, Zbigniew Mikulski, Zachary R Shaheen, Genhong Cheng, Kristy Sawatzke, Amanda M Campbell and 13 more

Open access · bronzeAbstract read
In one paragraph

Article in Immunity, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 137 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
137citing papers in PubMed, 1 pooled it
10.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

137 citing papers in PubMed, 1 synthesis or guideline pooled it, 200 citations in OpenAlex.

  1. Association ofFrontiers in immunology · 2021
    Pooled it
  2. Article
  3. An autoimmunity-associated allele ofProceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  4. Article
  5. Article
  6. Article
  7. An Autoimmunity-associated allele ofbioRxiv : the preprint server for biology · 2025
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Review
  14. Article
  15. Article
  16. Article
  17. Post-translational control of NLRP3 inflammasome signaling.The Journal of biological chemistry · 2024
    Review
  18. Review
  19. Article
  20. Review

77 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

23 authors at 5 institutions in 2 countries.

Yaya WangDepartment of Medicine, University of Minnesota, Minneapolis, MN 55455, USA.
Iftach Shaked
Stephanie M Stanford
Wenbo Zhou
Julie M Curtsinger
Zbigniew Mikulski
Zachary R Shaheen
Genhong Cheng
Kristy Sawatzke
Amanda M Campbell
Jennifer L Auger
Hatice Bilgic
Fernanda M Shoyama
David O Schmeling
Henry H Balfour
Kiminori Hasegawa
Andrew C Chan
John A Corbett
Bryce A Binstadt
Matthew F Mescher
Klaus Ley
Nunzio Bottini
Erik J Peterson
University of Minnesota · USLa Jolla Institute for Immunology · USMedical College of Wisconsin · USKin-ikyo Chuo Hospital · JPUniversity of California, Los Angeles · US

Funding

University of Minnesota Clinical and Translational Science Institute (UMN CTSI)UL1TR000114 · NCATS · UNIVERSITY OF MINNESOTA · PI BLAZAR, BRUCE R · 2012 to 2015
$35.0M
Ubiquitination Pathways Mediating Chronic Intestinal InflammationP01DK091222 · NIDDK · CASE WESTERN RESERVE UNIVERSITY · PI COMINELLI, FABIO · 2011 to 2020
$16.5M
Vitamin D Metabolism in LeprosyP50AR063020 · NIAMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI ADAMS, JOHN S · 2012 to 2016
$7.8M
Viral Mediated Type I Interferon InductionR01AI069120 · NIAID · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI CHENG, GENHONG · 2006 to 2021
$6.0M
PTPN22 AND AUTOIMMUNITYR01AI070544 · NIAID · UNIVERSITY OF SOUTHERN CALIFORNIA · PI BOTTINI, NUNZIO · 2008 to 2019
$4.0M
Mechanisms of Biodefense By Toll-Like ReceptorsR01AI056154 · NIAID · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI CHENG, GENHONG · 2004 to 2014
$3.7M
Divergence of Phagocytic and Antimicrobial Programs in LeprosyR01AI047868 · NIAID · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI MODLIN, ROBERT L · 2010 to 2014
$2.4M
The Role of IL-17 Axis in Inflammatory MyositisR01AR057781 · NIAMS · MAYO CLINIC ROCHESTER · PI NIEWOLD, TIMOTHY B, PETERSON, ERIK J · 2010 to 2014
$1.6M
Mechanisms of beta-cell damage during virus infectionF30DK102363 · NIDDK · MEDICAL COLLEGE OF WISCONSIN · PI SHAHEEN, ZACHARY R · 2014 to 2017
$179k
NCATS NIH HHS UL1 TR000114NIAID NIH HHS R01 AI047868NIAID NIH HHS R01 AI056154NIAID NIH HHS R01 AI069120NIAID NIH HHS R01 AI070544NIAID NIH HHS R01AI070544NIAMS NIH HHS P50 AR063020NIAMS NIH HHS R01 AR057781NIAMS NIH HHS R01AR057781NIDDK NIH HHS F30 DK102363NIDDK NIH HHS P01 DK091222
6 · The paper itself

Abstract

Immune cells sense microbial products through Toll-like receptors (TLR), which trigger host defense responses including type 1 interferons (IFNs) secretion. A coding polymorphism in the protein tyrosine phosphatase nonreceptor type 22 (PTPN22) gene is a susceptibility allele for human autoimmune and infectious disease. We report that Ptpn22 selectively regulated type 1 IFN production after TLR engagement in myeloid cells. Ptpn22 promoted host antiviral responses and was critical for TLR agonist-induced, type 1 IFN-dependent suppression of inflammation in colitis and arthritis. PTPN22 directly associated with TNF receptor-associated factor 3 (TRAF3) and promotes TRAF3 lysine 63-linked ubiquitination. The disease-associated PTPN22W variant failed to promote TRAF3 ubiquitination, type 1 IFN upregulation, and type 1 IFN-dependent suppression of arthritis. The findings establish a candidate innate immune mechanism of action for a human autoimmunity "risk" gene in the regulation of host defense and inflammation.

Indexed as

AnimalsArthritisAutoimmunityCell LineCells, CulturedColitisDextran SulfateHEK293 CellsHost-Pathogen InteractionsHumansImmunityImmunoblottingInterferon Type ILymphocytic ChoriomeningitisLymphocytic choriomeningitis virusMiceDextran SulfateInterferon Type IProtein Tyrosine Phosphatase, Non-Receptor Type 22Ptpn22 protein, mouseTNF Receptor-Associated Factor 3Toll-Like Receptors

Identifiers

PMID23871208
PMCPMC3830738
OpenAlexW2054355572

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.