Evidence map›Paper›PMID 23870195›Full record

SynthesisBMC medical genetics2013

Genetics of coronary artery calcification among African Americans, a meta-analysis.

Mary K Wojczynski, Mingyao Li, Lawrence F Bielak, Kathleen F Kerr, Alex P Reiner, Nathan D Wong, Lisa R Yanek, Liming Qu, Charles C White, Leslie A Lange and 35 more

Open access · goldAbstract readMeta-Analysis
In one paragraph

Synthesis in BMC medical genetics, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 53 papers, 7 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
53citing papers in PubMed, 7 pooled it
5.3field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

53 citing papers in PubMed, 7 syntheses or guidelines pooled it, 83 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Pooled it
  5. Pooled it
  6. Pooled it
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  8. Trial
  9. Proteogenomic Analysis of Coronary Artery Calcification in Human Populations.Arteriosclerosis, thrombosis, and vascular biology · 2026
    Article
  10. Review
  11. Article
  12. Association ofJournal of cardiovascular development and disease · 2024
    Article
  13. Review
  14. Review
  15. Article
  16. Review
  17. NIA Long Life Family Study: Objectives, Design, and Heritability of Cross-Sectional and Longitudinal Phenotypes.The journals of gerontology. Series A, Biological sciences and medical sciences · 2022
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

45 authors at 20 institutions in 2 countries.

Mary K WojczynskiDepartment of Genetics, Division of Statistical Genomics, Washington University School of Medicine, St. Louis, MO, USA. mwojczynski@wustl.edu
Mingyao Li
Lawrence F Bielak
Kathleen F Kerr
Alex P Reiner
Nathan D Wong
Lisa R Yanek
Liming Qu
Charles C White
Leslie A Lange
Jane F Ferguson
Jing He
Taylor Young
Thomas H Mosley
Jennifer A Smith
Brian G Kral
Xiuqing Guo
Quenna Wong
Santhi K Ganesh
Susan R Heckbert
Michael E Griswold
Daniel H O'Leary
Matthew Budoff
J Jeffrey Carr
Herman A Taylor
David A Bluemke
Serkalem Demissie
Shih-Jen Hwang
Dina N Paltoo
Joseph F Polak
Bruce M Psaty
Diane M Becker
Michael A Province
Wendy S Post
Christopher J O'Donnell
James G Wilson
Tamara B Harris
Maryam Kavousi
L Adrienne Cupples
Jerome I Rotter
Myriam Fornage
Lewis C Becker
Patricia A Peyser
Ingrid B Borecki
Muredach P Reilly
University of Pennsylvania · USUniversity of Washington · USJohns Hopkins Medicine · USUniversity of Michigan–Ann Arbor · USWashington University in St. Louis · USBoston University · USFramingham Heart Study · USJackson Memorial Hospital · USJohns Hopkins University · USNational Heart Lung and Blood Institute · USTufts University · USBroad Institute · USErasmus MC · NLGroup Health Cooperative · USHarbor–UCLA Medical Center · USMichigan Medicine · USNational Institute on Aging · USNational Institutes of Health Clinical Center · USThe Lundquist Institute · USUniversity of California, Irvine · US

Funding

UCLA Clinical and Translational Science InstituteUL1TR000124 · NCATS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI DUBINETT, STEVEN M. · 2012 to 2015
$57.0M
Transgenic & Knock-out MouseP30DK063491 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI Andrea L Hevener · 2003 to 2026
$40.4M
ZINC AND CA EDTA THERAPY OF PLUMBISMM01RR000052 · NCRR · JOHNS HOPKINS UNIVERSITY · PI MARSH, LAURA · 1985 to 2007
$37.3M
Multi-Ethnic Study of Atherosclerosis (MESA) StudyR01HL071205 · NHLBI · CEDARS-SINAI MEDICAL CENTER · PI ROTTER, JEROME I · 2003 to 2007
$10.4M
CHARGE Consortium: Omics Discovery for CVD and Aging PhenotypesR01HL105756 · NHLBI · UNIVERSITY OF WASHINGTON · PI Bruce M Psaty, NICHOLAS L SMITH · 2011 to 2026
$9.5M
Elucidation of Tissue-Specific Transcriptomic Profiles in Cardiometabolic DiseaseR01HL113147 · NHLBI · UNIVERSITY OF PENNSYLVANIA · PI LI, MINGYAO, REILLY, MUREDACH P · 2012 to 2022
$6.8M
FHS-SCAN Genome Wide Association Scan for Atherosclerosis Pathway GenesR01HL087700 · NHLBI · WASHINGTON UNIVERSITY · PI PROVINCE, MICHAEL A. · 2006 to 2008
$5.4M
Genomic Predictors of Arteriosclerosis in HypertensivesR01HL087660 · NHLBI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI KARDIA, SHARON L · 2007 to 2009
$5.1M
Genetic Architecture of Adiposity in Multiple Large CohortsR01DK089256 · NIDDK · WASHINGTON UNIVERSITY · PI BARANSKI, THOMAS JOHN, LIU, CHING-TI · 2010 to 2016
$4.6M
Genome-Wide Association of Platelet PhenotypesR01HL087698 · NHLBI · JOHNS HOPKINS UNIVERSITY · PI BECKER, LEWIS C · 2007 to 2009
$3.8M
GENOMIC SCAN FOR ATHEROSCLEROSIS PATHWAY GENES IN AFRICAN-AMERICANS FROM FHS-SCANR01HL088215 · NHLBI · WASHINGTON UNIVERSITY · PI PROVINCE, MICHAEL A. · 2008 to 2011
$3.0M
Genetics of atherosclerosis in renal diseaseR01DK071224 · NIDDK · UNIVERSITY OF PENNSYLVANIA · PI REILLY, MUREDACH P · 2006 to 2010
$2.9M
NCRR NIH HHS M01-RR000052NHGRI NIH HHS U01-HG004729NHLBI NIH HHS HL071025-01A1NHLBI NIH HHS HL085571NHLBI NIH HHS HL087660NHLBI NIH HHS HL100245NHLBI NIH HHS HL58625-01A1NHLBI NIH HHS HL59684NHLBI NIH HHS K24-HL107643NHLBI NIH HHS N02-HL-6-4278NHLBI NIH HHS R01HL071051NHLBI NIH HHS R01-HL-071205NHLBI NIH HHS R01HL071250NHLBI NIH HHS R01HL071251NHLBI NIH HHS R01HL071252NHLBI NIH HHS R01HL071258NHLBI NIH HHS R01HL071259NHLBI NIH HHS R01-HL084099NHLBI NIH HHS R01 HL087698-01NHLBI NIH HHS R01-HL-087700NHLBI NIH HHS R01-HL-088215NHLBI NIH HHS R01-HL113147NHLBI NIH HHS U01-HL108636NIDDK NIH HHS R01-DK071224NIDDK NIH HHS R01-DK-075681NIDDK NIH HHS R01-DK-090505NIDDK NIH HHS R01-DK-8925601NINR NIH HHS NR008153-01
6 · The paper itself

Abstract

backgroundCoronary heart disease (CHD) is the major cause of death in the United States. Coronary artery calcification (CAC) scores are independent predictors of CHD. African Americans (AA) have higher rates of CHD but are less well-studied in genomic studies. We assembled the largest AA data resource currently available with measured CAC to identify associated genetic variants.

methodsWe analyzed log transformed CAC quantity (ln(CAC + 1)), for association with ~2.5 million single nucleotide polymorphisms (SNPs) and performed an inverse-variance weighted meta-analysis on results for 5,823 AA from 8 studies. Heritability was calculated using family studies. The most significant SNPs among AAs were evaluated in European Ancestry (EA) CAC data; conversely, the significance of published SNPs for CAC/CHD in EA was queried within our AA meta-analysis.

resultsHeritability of CAC was lower in AA (~30%) than previously reported for EA (~50%). No SNP reached genome wide significance (p < 5E-08). Of 67 SNPs with p < 1E-05 in AA there was no evidence of association in EA CAC data. Four SNPs in regions previously implicated in CAC/CHD (at 9p21 and PHACTR1) in EA reached nominal significance for CAC in AA, with concordant direction. Among AA, rs16905644 (p = 4.08E-05) had the strongest association in the 9p21 region.

conclusionsWhile we observed substantial heritability for CAC in AA, we failed to identify loci for CAC at genome-wide significant levels despite having adequate power to detect alleles with moderate to large effects. Although suggestive signals in AA were apparent at 9p21 and additional CAC and CAD EA loci, overall the data suggest that even larger samples and an ethnic specific focus will be required for GWAS discoveries for CAC in AA populations.

Indexed as

AtherosclerosisBlack or African AmericanCoronary Artery DiseaseGenome-Wide Association StudyGenotypeHumansMicrofilament ProteinsPolymorphism, Single NucleotideVascular CalcificationMicrofilament ProteinsPHACTR1 protein, human

Identifiers

PMID23870195
PMCPMC3733595
OpenAlexW2132839298

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.