Evidence map›Paper›PMID 23868975›Full record

ArticleJournal of cell science2013

Damage response of XRCC1 at sites of DNA single strand breaks is regulated by phosphorylation and ubiquitylation after degradation of poly(ADP-ribose).

Leizhen Wei, Satoshi Nakajima, Ching-Lung Hsieh, Shinichiro Kanno, Mitsuko Masutani, Arthur S Levine, Akira Yasui, Li Lan

Open access · hybridAbstract read
In one paragraph

Article in Journal of cell science, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 60 papers.

0numbers the graph read from it
0cells of the map it votes in
60citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

60 citing papers in PubMed, 81 citations in OpenAlex.

  1. Article
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  8. Article
  9. Prospects for PARG inhibitors in cancer therapy.Journal of molecular cell biology · 2025
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  11. Article
  12. Article
  13. Article
  14. Poly ADP-ribose signaling is dysregulated in Huntington disease.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  15. Article
  16. Article
  17. 1,25-Dihydroxyvitamin DInternational journal of molecular sciences · 2024
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Leizhen WeiDepartment of Microbiology and Molecular Genetics, University of Pittsburgh School of Medicine, University of Pittsburgh, Pittsburgh, Pennsylvania, 15261, USA.
Satoshi Nakajima
Ching-Lung Hsieh
Shinichiro Kanno
Mitsuko Masutani
Arthur S Levine
Akira Yasui
Li Lan
University of Pittsburgh · USTohoku University · JP

Funding

VECTOR CORE FACILITYP30CA047904 · NCI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI JOHN C. BYRD · 1988 to 2026
$158.0M
Oxidative DNA base damage and repair at telomeres and the relevance to cell senesR21AG045545 · NIA · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI LAN, LI, OPRESKO, PATRICIA L · 2013 to 2014
$422k
NCI NIH HHS P30 CA047904NCI NIH HHS P30CA047904NIA NIH HHS R21 AG045545
6 · The paper itself

Abstract

Single-strand breaks (SSBs) are the most common type of oxidative DNA damage and they are related to aging and many genetic diseases. The scaffold protein for repair of SSBs, XRCC1, accumulates at sites of poly(ADP-ribose) (pAR) synthesized by PARP, but it is retained at sites of SSBs after pAR degradation. How XRCC1 responds to SSBs after pAR degradation and how this affects repair progression are not well understood. We found that XRCC1 dissociates from pAR and is translocated to sites of SSBs dependent on its BRCTII domain and the function of PARG. In addition, phosphorylation of XRCC1 is also required for the proper dissociation kinetics of XRCC1 because (1) phosphorylation sites mutated in XRCC1 (X1 pm) cause retention of XRCC1 at sites of SSB for a longer time compared to wild type XRCC1; and (2) phosphorylation of XRCC1 is required for efficient polyubiquitylation of XRCC1. Interestingly, a mutant of XRCC1, LL360/361DD, which abolishes pAR binding, shows significant upregulation of ubiquitylation, indicating that pARylation of XRCC1 prevents the poly-ubiquitylation. We also found that the dynamics of the repair proteins DNA polymerase beta, PNK, APTX, PCNA and ligase I are regulated by domains of XRCC1. In summary, the dynamic damage response of XRCC1 is regulated in a manner that depends on modifications of polyADP-ribosylation, phosphorylation and ubiquitylation in live cells.

Indexed as

DNA Breaks, Single-StrandedDNA-Binding ProteinsDNA Ligase ATPDNA LigasesDNA RepairHEK293 CellsHeLa CellsHumansPhosphorylationPoly-ADP-Ribose Binding ProteinsPoly(ADP-ribose) PolymerasesProtein Structure, TertiaryTransfectionUbiquitinationXenopus ProteinsX-ray Repair Cross Complementing Protein 1DNA-Binding ProteinsDNA Ligase ATPDNA ligase III alpha protein, XenopusDNA LigasesPoly-ADP-Ribose Binding ProteinsPoly(ADP-ribose) PolymerasesXenopus ProteinsX-ray Repair Cross Complementing Protein 1XRCC1 protein, humanDamage responsePhosphorylationPolyADP-ribosylationSingle strand breaksUbiquitylationXRCC1

Identifiers

PMID23868975
PMCPMC3784821
OpenAlexW2042256385

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.