Evidence map›Paper›PMID 23867463›Full record

ArticleThe Journal of biological chemistry2013

Autoxidation and oxygen binding properties of recombinant hemoglobins with substitutions at the αVal-62 or βVal-67 position of the distal heme pocket.

Ming F Tam, Natalie W Rice, David H Maillett, Virgil Simplaceanu, Nancy T Ho, Tsuey Chyi S Tam, Tong-Jian Shen, Chien Ho

Abstract read
In one paragraph

Article in The Journal of biological chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Hell's Gate Globin-I fromInternational journal of molecular sciences · 2024
    Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. New look at hemoglobin allostery.Chemical reviews · 2015
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Ming F TamFrom the Department of Biological Sciences, Carnegie Mellon University, Pittsburgh, Pennsylvania 15213.
Natalie W RiceFrom the Department of Biological Sciences, Carnegie Mellon University, Pittsburgh, Pennsylvania 15213.
David H MaillettFrom the Department of Biological Sciences, Carnegie Mellon University, Pittsburgh, Pennsylvania 15213.
Virgil SimplaceanuFrom the Department of Biological Sciences, Carnegie Mellon University, Pittsburgh, Pennsylvania 15213.
Nancy T HoFrom the Department of Biological Sciences, Carnegie Mellon University, Pittsburgh, Pennsylvania 15213.
Tsuey Chyi S TamFrom the Department of Biological Sciences, Carnegie Mellon University, Pittsburgh, Pennsylvania 15213.
Tong-Jian ShenFrom the Department of Biological Sciences, Carnegie Mellon University, Pittsburgh, Pennsylvania 15213.
Chien HoFrom the Department of Biological Sciences, Carnegie Mellon University, Pittsburgh, Pennsylvania 15213. Electronic address: chienho@andrew.cmu.edu.

Funding

PHYSICAL-CHEMICAL STUDY OF HEMOGLOBIN AND ERYTHROCYTER01HL024525 · NHLBI · CARNEGIE-MELLON UNIVERSITY · PI HO, CHIEN · 1985 to 2005
$4.0M
BIOPHYSICAL STUDIES OF HEMOGLOBINS &ERYTHROCYTESR37HL024525 · NHLBI · CARNEGIE-MELLON UNIVERSITY · PI HO, CHIEN · 1986 to 1995
–
Howard Hughes Medical InstituteNHLBI NIH HHS HL-024525NHLBI NIH HHS R01 HL024525NIGMS NIH HHS GM-0846140
6 · The paper itself

Abstract

The E11 valine in the distal heme pocket of either the α- or β-subunit of human adult hemoglobin (Hb A) was replaced by leucine, isoleucine, or phenylalanine. Recombinant proteins were expressed in Escherichia coli and purified for structural and functional studies. (1)H NMR spectra were obtained for the CO and deoxy forms of Hb A and the mutants. The mutations did not disturb the α1β2 interface in either form, whereas the H-bond between αHis-103 and βGln-131 in the α1β1 interfaces of the deoxy α-subunit mutants was weakened. Localized structural changes in the mutated heme pocket were detected for the CO form of recombinant Hb (rHb) (αV62F), rHb (βV67I), and rHb (βV67F) compared with Hb A. In the deoxy form the proximal histidyl residue in the β-subunit of rHb (βV67F) has been altered. Furthermore, the interactions between the porphyrin ring and heme pocket residues have been perturbed in rHb (αV62I), rHb (αV62F), and rHb (βV67F). Functionally, the oxygen binding affinity (P50), cooperativity (n50), and the alkaline Bohr Effect of the three α-subunit mutants and rHb (βV67L) are similar to those of Hb A. rHb (βV67I) and rHb (βV67F) exhibit low and high oxygen affinity, respectively. rHb (βV67F) has P50 values lower that those reported for rHb (αL29F), a B10 mutant studied previously in our laboratory (Wiltrout, M. E., Giovannelli, J. L., Simplaceanu, V., Lukin, J. A., Ho, N. T., and Ho, C. (2005) Biochemistry 44, 7207-7217). These E11 mutations do not slow down the autoxidation and azide-induced oxidation rates of the recombinant proteins. Results from this study provide new insights into the roles of E11 mutants in the structure-function relationship in hemoglobin.

Indexed as

Amino Acid SubstitutionAdultBinding SitesFemaleHemeHemoglobinsHumansMaleOxidation-ReductionRecombinant ProteinsStructure-Activity RelationshipValineHemeHemoglobinsRecombinant ProteinsValineAllosteric RegulationAutoxidationE11HemoglobinMutantNMROxygen Binding

Identifiers

PMID23867463
PMCPMC3757212

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.