Evidence map›Paper›PMID 23864707›Full record

ArticleMolecular biology of the cell2013

Sit4p/PP6 regulates ER-to-Golgi traffic by controlling the dephosphorylation of COPII coat subunits.

Deepali Bhandari, Jinzhong Zhang, Shekar Menon, Christopher Lord, Shuliang Chen, Jared R Helm, Kevin Thorsen, Kevin D Corbett, Jesse C Hay, Susan Ferro-Novick

Abstract read
In one paragraph

Article in Molecular biology of the cell, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
2.6field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 50 citations in OpenAlex.

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  12. Methods for Assessing the Regulation of a Kinase by the Rab GTPase Ypt1.Methods in molecular biology (Clifton, N.J.) · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Deepali BhandariDepartment of Cellular and Molecular Medicine, Howard Hughes Medical Institute, University of California at San Diego, La Jolla, CA 92093, USA.
Jinzhong Zhang
Shekar Menon
Christopher Lord
Shuliang Chen
Jared R Helm
Kevin Thorsen
Kevin D Corbett
Jesse C Hay
Susan Ferro-Novick
Howard Hughes Medical Institute · USUniversity of Montana · USLudwig Cancer Research · BE

Funding

Molecular mechanisms of chromosome organization and recombination control by the meiotic chromosome axis.R01GM104141 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI CORBETT, KEVIN DANIEL · 2013 to 2021
$3.1M
Regulation of ER to Golgi Transport byLuminal CalciumR15GM106323 · NIGMS · UNIVERSITY OF MONTANA · PI HAY, JESSE C · 2013 to 2022
$1.3M
Howard Hughes Medical InstituteNIGMS NIH HHS GM106323NIGMS NIH HHS R01 GM104141NIGMS NIH HHS R15 GM106323
6 · The paper itself

Abstract

Traffic from the endoplasmic reticulum (ER) to the Golgi complex is initiated when the activated form of the GTPase Sar1p recruits the Sec23p-Sec24p complex to ER membranes. The Sec23p-Sec24p complex, which forms the inner shell of the COPII coat, sorts cargo into ER-derived vesicles. The coat inner shell recruits the Sec13p-Sec31p complex, leading to coat polymerization and vesicle budding. Recent studies revealed that the Sec23p subunit sequentially interacts with three different binding partners to direct a COPII vesicle to the Golgi. One of these binding partners is the serine/threonine kinase Hrr25p. Hrr25p phosphorylates the COPII coat, driving the membrane-bound pool into the cytosol. The phosphorylated coat cannot rebind to the ER to initiate a new round of vesicle budding unless it is dephosphorylated. Here we screen all known protein phosphatases in yeast to identify one whose loss of function alters the cellular distribution of COPII coat subunits. This screen identifies the PP2A-like phosphatase Sit4p as a regulator of COPII coat dephosphorylation. Hyperphosphorylated coat subunits accumulate in the sit4Δ mutant in vivo. In vitro, Sit4p dephosphorylates COPII coat subunits. Consistent with a role in coat recycling, Sit4p and its mammalian orthologue, PP6, regulate traffic from the ER to the Golgi complex.

Indexed as

AnimalsChlorocebus aethiopsCOP-Coated VesiclesCOS CellsEndoplasmic ReticulumGolgi ApparatusHeLa CellsHumansMembrane ProteinsPhosphorylationProtein Phosphatase 2Saccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsVesicular Transport ProteinsMembrane ProteinsProtein Phosphatase 2Saccharomyces cerevisiae ProteinsSIT4 protein, S cerevisiaeVesicular Transport Proteins

Identifiers

PMID23864707
PMCPMC3756924
OpenAlexW2153452891

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.