Evidence map›Paper›PMID 23864691›Full record

ArticleThe Journal of neuroscience : the official journal of the Society for Neuroscience2013

Asynchronous movements prior to pore opening in NMDA receptors.

Rashek Kazi, Quan Gan, Iehab Talukder, Michael Markowitz, Catherine L Salussolia, Lonnie P Wollmuth

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of neuroscience : the official journal of the Society for Neuroscience, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 55 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Structural insights into NMDA receptor pharmacology.Biochemical Society transactions · 2023
    Review
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Cross-subunit interactions that stabilize open states mediate gating in NMDA receptors.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  11. Review
  12. Article
  13. Prying open a glutamate receptor gate.The Journal of general physiology · 2019
    Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 2 countries.

Rashek KaziGraduate Program in Neuroscience, Stony Brook University, Stony Brook, New York 11794-5230, USA.
Quan Gan
Iehab Talukder
Michael Markowitz
Catherine L Salussolia
Lonnie P Wollmuth
Institute of Neurobiology · BG

Funding

MEDICAL SCIENTIST TRAINING PROGRAMT32GM008444 · NIGMS · STATE UNIVERSITY NEW YORK STONY BROOK · PI FROHMAN, MICHAEL A. · 1992 to 2024
$12.6M
Functional Architecture of Glutamate Receptor ChannelsR01MH066892 · NIMH · STATE UNIVERSITY NEW YORK STONY BROOK · PI WOLLMUTH, LONNIE P · 2003 to 2012
$3.0M
Electrostatic Interactions in the Transduction Pathway Alter NMDAR GatingF31NS077541 · NINDS · STATE UNIVERSITY NEW YORK STONY BROOK · PI KAZI, RASHEK · 2011 to 2013
$141k
NIGMS NIH HHS T32 GM008444NIMH NIH HHS R01 MH066892NINDS NIH HHS F31 NS077541NINDS NIH HHS NS077541
6 · The paper itself

Abstract

Glutamate-gated ion channels embedded within the neuronal membrane are the primary mediators of fast excitatory synaptic transmission in the CNS. The ion channel of these glutamate receptors contains a pore-lining transmembrane M3 helix surrounded by peripheral M1 and M4 helices. In the NMDA receptor subtype, opening of the ion channel pore, mediated by displacement of the M3 helices away from the central pore axis, occurs in a highly concerted fashion, but the associated temporal movements of the peripheral helices are unknown. To address the gating dynamics of the peripheral helices, we constrained the relative movements of the linkers that connect these helices to the ligand-binding domain using engineered cross-links, either within (intra-GluN1 or GluN2A) or between subunits. Constraining the peripheral linkers in any manner dramatically curtailed channel opening, highlighting the requirement for rearrangements of these peripheral structural elements for efficient gating to occur. However, the magnitude of this gating effect depended on the specific subunit being constrained, with the most dramatic effects occurring when the constraint was between subunits. Based on kinetic and thermodynamic analysis, our results suggest an asynchrony in the displacement of the peripheral linkers during the conformational and energetic changes leading to pore opening. Initially there are large-scale rearrangements occurring between the four subunits. Subsequently, rearrangements occur within individual subunits, mainly GluN2A, leading up to or in concert with pore opening. Thus, the conformational changes induced by agonist binding in NMDA receptors converge asynchronously to permit pore opening.

Indexed as

AnimalsBinding SitesHEK293 CellsHumansIon Channel GatingModels, MolecularProtein SubunitsRatsReceptors, N-Methyl-D-AspartateProtein SubunitsReceptors, N-Methyl-D-Aspartate

Identifiers

PMID23864691
PMCPMC3713736
OpenAlexW1976234796

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.