Evidence map›Paper›PMID 23864654›Full record

ArticleThe Journal of biological chemistry2013

Quantification of mitochondrial acetylation dynamics highlights prominent sites of metabolic regulation.

Amelia J Still, Brendan J Floyd, Alexander S Hebert, Craig A Bingman, Joshua J Carson, Drew R Gunderson, Brendan K Dolan, Paul A Grimsrud, Kristin E Dittenhafer-Reed, Donald S Stapleton and 6 more

Abstract read
In one paragraph

Article in The Journal of biological chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 74 papers.

0numbers the graph read from it
0cells of the map it votes in
74citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

74 citing papers in PubMed.

  1. Article
  2. Article
  3. MOF moves into mitochondria.Nature metabolism · 2023
    Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Insights Into the Role of Mitochondria in Vascular Calcification.Frontiers in cardiovascular medicine · 2022
    Review
  14. Review
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article

14 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Amelia J StillFrom the Departments of Biochemistry.
Brendan J FloydFrom the Departments of Biochemistry.
Alexander S HebertChemistry, and; Genome Center of Wisconsin, University of Wisconsin-Madison, Madison, Wisconsin 53706.
Craig A BingmanFrom the Departments of Biochemistry.
Joshua J CarsonFrom the Departments of Biochemistry.
Drew R GundersonFrom the Departments of Biochemistry.
Brendan K DolanFrom the Departments of Biochemistry.
Paul A GrimsrudFrom the Departments of Biochemistry.
Kristin E Dittenhafer-ReedBiomolecular Chemistry and.
Donald S StapletonFrom the Departments of Biochemistry.
Mark P KellerFrom the Departments of Biochemistry.
Michael S WestphallGenome Center of Wisconsin, University of Wisconsin-Madison, Madison, Wisconsin 53706.
John M DenuBiomolecular Chemistry and.
Alan D AttieFrom the Departments of Biochemistry.
Joshua J CoonChemistry, and; Genome Center of Wisconsin, University of Wisconsin-Madison, Madison, Wisconsin 53706; Biomolecular Chemistry and.
David J PagliariniFrom the Departments of Biochemistry,. Electronic address: pagliarini@wisc.edu.

Funding

UW COMPREHENSIVE CANCER CENTER SUPPORTP30CA014520 · NCI · UNIVERSITY OF WISCONSIN-MADISON · PI Nihal Ahmad · 1985 to 2026
$142.6M
GRADUATE TRAINING IN MOLECULAR BIOSCIENCEST32GM007215 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI HULL, CHRISTINA M · 1985 to 2018
$22.5M
BIOTECHNOLOGY TRAINING PROGRAMT32GM008349 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI FOX, BRIAN G · 1989 to 2019
$22.5M
INTEGRATED TRAINING FOR PHYSICIAN-SCIENTISTST32GM008692 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI BURKARD, MARK E · 1998 to 2020
$10.3M
TRAINING IN NUTRITIONT32DK007665 · NIDDK · UNIVERSITY OF WISCONSIN-MADISON · PI GUY E GROBLEWSKI, Chi- Liang Eric Yen · 1993 to 2026
$9.2M
Partnership for High-Throughput Enabled Biology of the Mitochondrial ProteomeU01GM094622 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI MARKLEY, JOHN LUTE · 2010 to 2014
$7.8M
Reversible protein acetylation and sirtuin functionR01GM065386 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI DENU, JOHN M · 2003 to 2022
$7.3M
Genetic Mapping of Networks Associated with Beta-cell D*R01DK066369 · NIDDK · UNIVERSITY OF WISCONSIN-MADISON · PI ATTIE, ALAN D · 2004 to 2014
$6.3M
The Genetics of Obesity and DiabetesR01DK058037 · NIDDK · UNIVERSITY OF WISCONSIN-MADISON · PI ATTIE, ALAN D · 2001 to 2013
$5.7M
Regulation of Mitochondrial Metabolism by Post-Translational ModificationsR01DK098672 · NIDDK · WASHINGTON UNIVERSITY · PI David J Pagliarini · 2013 to 2026
$4.8M
Molecular mechanisms of histone modification - Alzheimer’s supplement NOT-AG-18-008R37GM059785 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI DENU, JOHN M · 2013 to 2022
$3.7M
Sequential Ion/Ion Reactions for Large Peptide and Whole Protein CharacterizationR01GM080148 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI COON, JOSHUA J · 2007 to 2015
$3.0M
NCI NIH HHS P30 CA014520NIA NIH HHS AG038679NIA NIH HHS R01 AG038679NIDDK NIH HHS DK058037NIDDK NIH HHS DK066369NIDDK NIH HHS F32 DK091049NIDDK NIH HHS F32DK091049NIDDK NIH HHS R01 DK058037NIDDK NIH HHS R01 DK066369NIDDK NIH HHS R01 DK098672NIDDK NIH HHS R01DK098672NIDDK NIH HHS RC1 DK086410NIDDK NIH HHS RC1DK086410NIDDK NIH HHS T32 DK007665NIDDK NIH HHS T32DK007665NIGMS NIH HHS 5T32GM007215-37NIGMS NIH HHS 5T32GM08349NIGMS NIH HHS GM065386NIGMS NIH HHS R01 GM065386NIGMS NIH HHS R01 GM080148NIGMS NIH HHS R01GM080148NIGMS NIH HHS R37 GM059785NIGMS NIH HHS T32 GM007215NIGMS NIH HHS T32 GM008349NIGMS NIH HHS T32 GM008692NIGMS NIH HHS T32GM008692NIGMS NIH HHS U01 GM094622NIGMS NIH HHS U01GM094622
6 · The paper itself

Abstract

Lysine acetylation is rapidly becoming established as a key post-translational modification for regulating mitochondrial metabolism. Nonetheless, distinguishing regulatory sites from among the thousands identified by mass spectrometry and elucidating how these modifications alter enzyme function remain primary challenges. Here, we performed multiplexed quantitative mass spectrometry to measure changes in the mouse liver mitochondrial acetylproteome in response to acute and chronic alterations in nutritional status, and integrated these data sets with our compendium of predicted Sirt3 targets. These analyses highlight a subset of mitochondrial proteins with dynamic acetylation sites, including acetyl-CoA acetyltransferase 1 (Acat1), an enzyme central to multiple metabolic pathways. We performed in vitro biochemistry and molecular modeling to demonstrate that acetylation of Acat1 decreases its activity by disrupting the binding of coenzyme A. Collectively, our data reveal an important new target of regulatory acetylation and provide a foundation for investigating the role of select mitochondrial protein acetylation sites in mediating acute and chronic metabolic transitions.

Indexed as

AcetylationAcetyl-CoA C-AcetyltransferaseAcetyl Coenzyme AAnimalsMiceMice, ObeseMitochondria, LiverProteomeSirtuin 3Acat1 protein, mouseAcetyl-CoA C-AcetyltransferaseAcetyl Coenzyme AProteomeSirt3 protein, mouseSirtuin 3Acat1Energy MetabolismMetabolic RegulationMitochondrial MetabolismProtein AcylationProteomicsSIRT

Identifiers

PMID23864654
PMCPMC3764825

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.