Evidence map›Paper›PMID 23863232›Full record

ReviewCritical care medicine2013

In silico modeling: methods and applications to trauma and sepsis.

Yoram Vodovotz, Timothy R Billiar

Open access · greenAbstract readReview
In one paragraph

Review in Critical care medicine, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed, 1 pooled it
17.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 1 synthesis or guideline pooled it, 61 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. What's next for computational systems biology?Frontiers in systems biology · 2023
    Review
  4. Review
  5. Review
  6. Article
  7. Review
  8. Review
  9. Article
  10. Article
  11. Review
  12. Review
  13. Article
  14. Article
  15. Article
  16. Systems Medicine-Complexity Within, Simplicity Without.Journal of healthcare informatics research · 2017
    Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 1 country.

Yoram VodovotzDepartment of Surgery, University of Pittsburgh, Pittsburgh, PA, USA. vodovotzy@upmc.edu
Timothy R Billiar
McGowan Institute for Regenerative Medicine · USUniversity of Pittsburgh · US

Funding

Multi-Center Group to Study Acute Liver Failure in ChildU01DK072146 · NIDDK · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI SQUIRES, ROBERT H · 2005 to 2014
$23.2M
Regulation of Intestinal Mucosal Injury & Repair After Trauma/Hemorrhagic ShockP50GM053789 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI BILLIAR, TIMOTHY R · 1997 to 2013
$18.0M
Systems Engineering of Pheresis Intervention for SepsisR01HL080926 · NHLBI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI KELLUM, JOHN A · 2005 to 2009
$6.8M
Systems biology approach to MAPK regulation of malaria infection in A. stephensiR01AI080799 · NIAID · UNIVERSITY OF CALIFORNIA AT DAVIS · PI LUCKHART, SHIRLEY, VODOVOTZ, YORAM · 2009 to 2013
$3.4M
Hybrid Model of Vocal Inflammation and Tissue MobilizationR01DC008290 · NIDCD · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI VERDOLINI, KATHERINE · 2007 to 2011
$2.8M
Metabolic-Inflammatory Systems in Irreversible ShockR01HL076157 · NHLBI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI PUYANA, JUAN CARLOS · 2004 to 2007
$1.4M
Mathematical Modeling of Inflammation in ARDSR33HL089082 · NHLBI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI VODOVOTZ, YORAM · 2008 to 2010
$1.3M
Modeling the acute inflammatory responseR01GM067240 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI CLERMONT, GILLES · 2002 to 2005
$1.3M
NHLBI NIH HHS R01 HL076157NHLBI NIH HHS R01 HL080926NHLBI NIH HHS R01HL080926NHLBI NIH HHS R33 HL089082NHLBI NIH HHS R33HL089082NIAID NIH HHS R01 AI080799NIAID NIH HHS R01AI080799NIDCD NIH HHS R01 DC008290NIDCD NIH HHS R01DC008290NIDDK NIH HHS U01 DK072146NIDDK NIH HHS UO1-DK072146NIGMS NIH HHS P50 GM053789NIGMS NIH HHS P50-GM-53789NIGMS NIH HHS R01 GM067240NIGMS NIH HHS R01GM67240
6 · The paper itself

Abstract

objectivesTo familiarize clinicians with advances in computational disease modeling applied to trauma and sepsis. DATA SOURCES: PubMed search and review of relevant medical literature. SUMMARY: Definitions, key methods, and applications of computational modeling to trauma and sepsis are reviewed.

conclusionsComputational modeling of inflammation and organ dysfunction at the cellular, organ, whole-organism, and population levels has suggested a positive feedback cycle of inflammation → damage → inflammation that manifests via organ-specific inflammatory switching networks. This structure may manifest as multicompartment "tipping points" that drive multiple organ dysfunction. This process may be amenable to rational inflammation reprogramming.

Indexed as

Computer SimulationModels, BiologicalCritical IllnessHumansInflammationSepsisSystems BiologyWounds and Injuries

Identifiers

PMID23863232
PMCPMC3722589
OpenAlexW1989019965

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.