Evidence map›Paper›PMID 23861987›Full record

ArticlePLoS neglected tropical diseases2013

Transcriptomic profiling of diverse Aedes aegypti strains reveals increased basal-level immune activation in dengue virus-refractory populations and identifies novel virus-vector molecular interactions.

Shuzhen Sim, Natapong Jupatanakul, José L Ramirez, Seokyoung Kang, Claudia M Romero-Vivas, Hamish Mohammed, George Dimopoulos

Open access · goldAbstract readComparative Study
In one paragraph

Article in PLoS neglected tropical diseases, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 114 papers.

0numbers the graph read from it
0cells of the map it votes in
114citing papers in PubMed
13.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

114 citing papers in PubMed, 161 citations in OpenAlex.

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  13. UnveilingFrontiers in cellular and infection microbiology · 2025
    Article
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  16. Review
  17. A comprehensive review ofFrontiers in immunology · 2024
    Review
  18. Review
  19. Article
  20. Article

54 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 3 countries.

Shuzhen SimW. Harry Feinstone Department of Molecular Microbiology and Immunology, Bloomberg School of Public Health, Johns Hopkins University, Baltimore, Maryland, USA.
Natapong Jupatanakul
José L Ramirez
Seokyoung Kang
Claudia M Romero-Vivas
Hamish Mohammed
George Dimopoulos
Johns Hopkins University · USUniversidad del Norte · COUniversity of Trinidad and Tobago · TT

Funding

Targeting dengue in the mosquito with small moleculesR01AI101431 · NIAID · JOHNS HOPKINS UNIVERSITY · PI DIMOPOULOS, GEORGE, ENGEL, DANIEL A · 2012 to 2016
$4.3M
Aedes anti-dengue immunityR01AI078997 · NIAID · JOHNS HOPKINS UNIVERSITY · PI DIMOPOULOS, GEORGE · 2009 to 2010
$805k
The JAK-STAT pathway in anti-dengue defenseR21AI090188 · NIAID · JOHNS HOPKINS UNIVERSITY · PI DIMOPOULOS, GEORGE · 2010 to 2011
$448k
Dissection of the mosquito Aedes Aegypti's immune responses to Dengue infection.F31AI080161 · NIAID · JOHNS HOPKINS UNIVERSITY · PI RAMIREZ, JOSE LUIS · 2009 to 2011
$106k
NIAID NIH HHS 1F31AI080161-01A1NIAID NIH HHS F31 AI080161NIAID NIH HHS R01 AI078997NIAID NIH HHS R01AI078997NIAID NIH HHS R01 AI101431NIAID NIH HHS R01AI101431NIAID NIH HHS R21 AI090188NIAID NIH HHS R21AI090188
6 · The paper itself

Abstract

Genetic variation among Aedes aegypti populations can greatly influence their vector competence for human pathogens such as the dengue virus (DENV). While intra-species transcriptome differences remain relatively unstudied when compared to coding sequence polymorphisms, they also affect numerous aspects of mosquito biology. Comparative molecular profiling of mosquito strain transcriptomes can therefore provide valuable insight into the regulation of vector competence. We established a panel of A. aegypti strains with varying levels of susceptibility to DENV, comprising both laboratory-maintained strains and field-derived colonies collected from geographically distinct dengue-endemic regions spanning South America, the Caribbean, and Southeast Asia. A comparative genome-wide gene expression microarray-based analysis revealed higher basal levels of numerous immunity-related gene transcripts in DENV-refractory mosquito strains than in susceptible strains, and RNA interference assays further showed different degrees of immune pathway contribution to refractoriness in different strains. By correlating transcript abundance patterns with DENV susceptibility across our panel, we also identified new candidate modulators of DENV infection in the mosquito, and we provide functional evidence for two potential DENV host factors and one potential restriction factor. Our comparative transcriptome dataset thus not only provides valuable information about immune gene regulation and usage in natural refractoriness of mosquito populations to dengue virus but also allows us to identify new molecular interactions between the virus and its mosquito vector.

Indexed as

Gene Expression RegulationHost-Pathogen InteractionsInsect VectorsAedesAnimalsAsia, SoutheasternCaribbean RegionDengue VirusFemaleGene Expression ProfilingMicroarray AnalysisSouth America

Identifiers

PMID23861987
PMCPMC3701703
OpenAlexW2050733663

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.