Evidence map›Paper›PMID 23861948›Full record

ArticlePloS one2013

LHX3 interacts with inhibitor of histone acetyltransferase complex subunits LANP and TAF-1β to modulate pituitary gene regulation.

Chad S Hunter, Raleigh E Malik, Frank A Witzmann, Simon J Rhodes

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed, 1 pooled it
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 1 synthesis or guideline pooled it, 12 citations in OpenAlex.

  1. Identification of novelThe Journal of international medical research · 2021
    Pooled it
  2. Review
  3. Article
  4. Cracking the ANP32 whips: important functions, unequal requirement, and hints at disease implications.BioEssays : news and reviews in molecular, cellular and developmental biology · 2014
    Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Chad S HunterDepartment of Biology, Indiana University-Purdue University Indianapolis, Indiana, United States of America.
Raleigh E Malik
Frank A Witzmann
Simon J Rhodes
Indiana University – Purdue University Indianapolis · USIndiana University School of Medicine

Funding

Role of LHX3 Protein Isoforms in Pituitary DevelopmentR01HD042024 · NICHD · INDIANA UNIV-PURDUE UNIV AT INDIANAPOLIS · PI RHODES, SIMON JAMES · 2002 to 2012
$2.6M
Nanoparticle Effects on Epithelial Cell Protein Expression and FunctionR01GM085218 · NIGMS · INDIANA UNIVERSITY INDIANAPOLIS · PI WITZMANN, FRANK A · 2008 to 2012
$2.1M
Characterization Methodologies & Proteomics to Assess Carbon Nanotube ExposureRC2ES018810 · NIEHS · INDIANA UNIVERSITY INDIANAPOLIS · PI MITRA, SOMENATH, WITZMANN, FRANK A · 2009 to 2012
$1.5M
NICHD NIH HHS HD42024NICHD NIH HHS R01 HD042024NIEHS NIH HHS ES018810NIEHS NIH HHS RC2 ES018810NIGMS NIH HHS GM085218NIGMS NIH HHS R01 GM085218
6 · The paper itself

Abstract

LIM-homeodomain 3 (LHX3) is a transcription factor required for mammalian pituitary gland and nervous system development. Human patients and animal models with LHX3 gene mutations present with severe pediatric syndromes that feature hormone deficiencies and symptoms associated with nervous system dysfunction. The carboxyl terminus of the LHX3 protein is required for pituitary gene regulation, but the mechanism by which this domain operates is unknown. In order to better understand LHX3-dependent pituitary hormone gene transcription, we used biochemical and mass spectrometry approaches to identify and characterize proteins that interact with the LHX3 carboxyl terminus. This approach identified the LANP/pp32 and TAF-1β/SET proteins, which are components of the inhibitor of histone acetyltransferase (INHAT) multi-subunit complex that serves as a multifunctional repressor to inhibit histone acetylation and modulate chromatin structure. The protein domains of LANP and TAF-1β that interact with LHX3 were mapped using biochemical techniques. Chromatin immunoprecipitation experiments demonstrated that LANP and TAF-1β are associated with LHX3 target genes in pituitary cells, and experimental alterations of LANP and TAF-1β levels affected LHX3-mediated pituitary gene regulation. Together, these data suggest that transcriptional regulation of pituitary genes by LHX3 involves regulated interactions with the INHAT complex.

Indexed as

AcetylationAnimalsBinding SitesCell LineChromatinGene Expression RegulationGenes, ReporterHEK293 CellsHistone AcetyltransferasesHistonesHumansLIM-Homeodomain ProteinsLuciferasesMicePituitary GlandProtein BindingChromatinHistone AcetyltransferasesHistonesLhx3 proteinLIM-Homeodomain ProteinsLuciferasesProtein SubunitsTATA-binding protein associated factor 250 kDaTATA-Binding Protein Associated FactorsTranscription FactorsTranscription Factor TFIID

Identifiers

PMID23861948
PMCPMC3701669
OpenAlexW2017549087

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.