Evidence map›Paper›PMID 23861741›Full record

ArticlePloS one2013

Global transcriptomic analysis of human neuroblastoma cells in response to enterovirus type 71 infection.

Li-Juan Xu, Tao Jiang, Fu-Jun Zhang, Jian-Feng Han, Juan Liu, Hui Zhao, Xiao-Feng Li, Rui-Ju Liu, Yong-Qiang Deng, Xiao-Yan Wu and 3 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 30 citations in OpenAlex.

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  9. Review
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  13. Differentiation of the SH-SY5Y Human Neuroblastoma Cell Line.Journal of visualized experiments : JoVE · 2016
    Article
  14. Article
  15. Gene expression and highly diluted molecules.Frontiers in pharmacology · 2014
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 1 country.

Li-Juan XuDepartment of Virology, State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Beijing, China.
Tao Jiang
Fu-Jun Zhang
Jian-Feng Han
Juan Liu
Hui Zhao
Xiao-Feng Li
Rui-Ju Liu
Yong-Qiang Deng
Xiao-Yan Wu
Shun-Ya Zhu
E-De Qin
Cheng-Feng Qin
Wuhan Institute of Virology · CNLiaocheng People's Hospital · CNPeople’s Hospital of Rizhao · CNWeihai Chest Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Human enterovirus type 71 (EV71) is the major pathogen of hand-foot-and-mouth disease (HFMD) and has been associated with severe neurological disease and even death in infants and young children. The pathogenesis of EV71 infection in the human central nervous system remains unclear. In this study, human whole genome microarray was employed to perform transcriptome profiling in SH-SY5Y human neuroblastoma cells infected with EV71. The results indicated that EV71 infection lead to altered expression of 161 human mRNAs, including 74 up-regulated genes and 87 down-regulated genes. Bioinformatics analysis indicated the possible roles of the differentially regulated mRNAs in selected pathways, including cell cycle/proliferation, apoptosis, and cytokine/chemokine responses. Finally, the microarray results were validated using real-time RT-PCR with high identity. Overall, our results provided fundamental information regarding the host response to EV71 infection in human neuroblastoma cells, and this finding will help explain the pathogenesis of EV71 infection and virus-host interaction.

Indexed as

Gene Expression ProfilingGene Expression RegulationCell Line, TumorCluster AnalysisEnterovirus A, HumanHumansMolecular Sequence AnnotationNeuroblastomaReproducibility of ResultsViral Tropism

Identifiers

PMID23861741
PMCPMC3702535
OpenAlexW2033846385

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.