Evidence map›Paper›PMID 23861060›Full record

ArticleDevelopment (Cambridge, England)2013

Phagocytic receptor signaling regulates clathrin and epsin-mediated cytoskeletal remodeling during apoptotic cell engulfment in C. elegans.

Qian Shen, Bin He, Nan Lu, Barbara Conradt, Barth D Grant, Zheng Zhou

Open access · bronzeAbstract read
In one paragraph

Article in Development (Cambridge, England), 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
1.5field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 48 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. eLife · 2022
    Article
  8. Article
  9. Article
  10. The Ubiquitin-Proteasome System in Apoptosis and Apoptotic Cell Clearance.Frontiers in cell and developmental biology · 2022
    Review
  11. Conserved and Distinct Elements of Phagocytosis in Human andInternational journal of molecular sciences · 2021
    Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Control of developmental networks by Rac/Rho small GTPases: How cytoskeletal changes during embryogenesis are orchestrated.BioEssays : news and reviews in molecular, cellular and developmental biology · 2016
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Qian ShenVerna and Marrs McLean Department of Biochemistry and Molecular Biology, Baylor College of Medicine, One Baylor Plaza, Houston, TX 77030, USA.
Bin He
Nan Lu
Barbara Conradt
Barth D Grant
Zheng Zhou
Baylor College of Medicine · US

Funding

Membrane Traffic in C. elegans and MammalsR01GM067237 · NIGMS · RUTGERS THE ST UNIV OF NJ NEW BRUNSWICK · PI GRANT, BARTH DEMIAN · 2003 to 2019
$6.1M
Recognition of Apoptotic Cells for Their PhagocytosisR01GM067848 · NIGMS · BAYLOR COLLEGE OF MEDICINE · PI ZHOU, ZHENG · 2003 to 2021
$5.7M
Analysis of Cell Death Regulation in C.elegansR01GM069950 · NIGMS · LUDWIG MAXIMILIAN UNIVERSITY · PI CONRADT, BARBARA · 2004 to 2012
$2.7M
Regulation and role of dynamin-related GTPases in C. elegans apoptosisR01GM076651 · NIGMS · LUDWIG MAXIMILIAN UNIVERSITY · PI CONRADT, BARBARA · 2008 to 2011
$943k
NIGMS NIH HHS GM067237NIGMS NIH HHS GM067848NIGMS NIH HHS GM069950NIGMS NIH HHS GM076651NIGMS NIH HHS R01 GM067237NIGMS NIH HHS R01 GM067848NIGMS NIH HHS R01 GM069950NIGMS NIH HHS R01 GM076651
6 · The paper itself

Abstract

The engulfment and subsequent degradation of apoptotic cells by phagocytes is an evolutionarily conserved process that efficiently removes dying cells from animal bodies during development. Here, we report that clathrin heavy chain (CHC-1), a membrane coat protein well known for its role in receptor-mediated endocytosis, and its adaptor epsin (EPN-1) play crucial roles in removing apoptotic cells in Caenorhabditis elegans. Inactivating epn-1 or chc-1 disrupts engulfment by impairing actin polymerization. This defect is partially suppressed by inactivating UNC-60, a cofilin ortholog and actin server/depolymerization protein, further indicating that EPN-1 and CHC-1 regulate actin assembly during pseudopod extension. CHC-1 is enriched on extending pseudopods together with EPN-1, in an EPN-1-dependent manner. Epistasis analysis places epn-1 and chc-1 in the same cell-corpse engulfment pathway as ced-1, ced-6 and dyn-1. CED-1 signaling is necessary for the pseudopod enrichment of EPN-1 and CHC-1. CED-1, CED-6 and DYN-1, like EPN-1 and CHC-1, are essential for the assembly and stability of F-actin underneath pseudopods. We propose that in response to CED-1 signaling, CHC-1 is recruited to the phagocytic cup through EPN-1 and acts as a scaffold protein to organize actin remodeling. Our work reveals novel roles of clathrin and epsin in apoptotic-cell internalization, suggests a Hip1/R-independent mechanism linking clathrin to actin assembly, and ties the CED-1 pathway to cytoskeleton remodeling.

Indexed as

ActinsAdaptor Proteins, Vesicular TransportAmino Acid SequenceAnimalsAnimals, Genetically ModifiedApoptosisCaenorhabditis elegansCaenorhabditis elegans ProteinsClathrin Heavy ChainsCytoskeletonDynaminsGene Knockdown TechniquesGenes, HelminthMembrane ProteinsMicrofilament ProteinsMolecular Sequence DataActinsAdaptor Proteins, Vesicular TransportCaenorhabditis elegans Proteinsced-1 protein, C elegansClathrin Heavy ChainsDyn-1 protein, C elegansDynaminsepsinMembrane ProteinsMicrofilament ProteinsReceptors, Cell SurfaceUNC-60 protein, C elegansActin cytoskeletonApoptotic cell engulfmentC. elegansClathrinEpsinMembrane remodeling

Identifiers

PMID23861060
PMCPMC3931732
OpenAlexW1989442441

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.