Evidence map›Paper›PMID 23856240›Full record

ArticleMetabolic engineering2013

Use of expression-enhancing terminators in Saccharomyces cerevisiae to increase mRNA half-life and improve gene expression control for metabolic engineering applications.

Kathleen A Curran, Ashty S Karim, Akash Gupta, Hal S Alper

Abstract read
In one paragraph

Article in Metabolic engineering, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 87 papers.

0numbers the graph read from it
0cells of the map it votes in
87citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

87 citing papers in PubMed.

  1. Article
  2. Systematic optimization ofEngineering microbiology · 2026
    Review
  3. Article
  4. Review
  5. Review
  6. A modular single- and dual-gene expression toolkit for Kluyveromyces marxianus.World journal of microbiology & biotechnology · 2026
    Article
  7. Review
  8. Review
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Systems Metabolic Engineering ofJournal of fungi (Basel, Switzerland) · 2024
    Article
  18. Review
  19. Effect ofPeerJ · 2024
    Article
  20. Construction and Characterization of Light-Responsive Transcriptional Systems.Methods in molecular biology (Clifton, N.J.) · 2024
    Article

27 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Kathleen A CurranDepartment of Chemical Engineering, The University of Texas at Austin, 200 E Dean Keeton St. Stop C0400, Austin 78712, TX, United States.
Ashty S Karim
Akash Gupta
Hal S Alper

Funding

Rerouting Metabolism through Fine-tuned Genetic Control of Essential GenesR01GM090221 · NIGMS · UNIVERSITY OF TEXAS AT AUSTIN · PI ALPER, HAL S. · 2009 to 2011
$513k
NIGMS NIH HHS R01 GM090221NIGMS NIH HHS R01GM090221
6 · The paper itself

Abstract

Control of gene and protein expression of both endogenous and heterologous genes is a key component of metabolic engineering. While a large amount of work has been published characterizing promoters for this purpose, less effort has been exerted to elucidate the role of terminators in yeast. In this study, we characterize over 30 terminators for use in metabolic engineering applications in Saccharomyces cerevisiae and determine mRNA half-life changes to be the major cause of the varied protein and transcript expression level. We demonstrate that the difference in transcript level can be over 6.5-fold even for high strength promoters. The influence of terminator selection is magnified when coupled with a low-expression promoter, with a maximum difference in protein expression of 11-fold between an expression-enhancing terminator and the parent plasmid terminator and over 35-fold difference when compared with a no-terminator baseline. This is the first time that terminators have been investigated in the context of multiple promoters spanning orders of magnitude in activity. Finally, we demonstrate the utility of terminator selection for metabolic engineering by using a mutant xylose isomerase gene as a proof-of-concept. Through pairing an expression-enhancing terminator with a low-expression promoter, we were able to achieve the same phenotypic result as with a promoter considerably higher in strength. Moreover, we can further boost the phenotype of the high-strength promoter by pairing it with an expression-enhancing terminator. This work highlights how terminator elements can be used to control metabolic pathways in the same way that promoters are traditionally used in yeast. Together, this work demonstrates that terminators will be an important part of heterologous gene expression and metabolic engineering for yeast in the future.

Indexed as

Gene Expression Regulation, FungalMetabolic EngineeringRNA StabilityTerminator Regions, GeneticPromoter Regions, GeneticRNA, FungalRNA, MessengerSaccharomyces cerevisiaeRNA, FungalRNA, MessengerMetabolic engineeringSaccharomyces cerevisiaeTerminatorYeast

Identifiers

PMID23856240
PMCPMC3769427

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.