Evidence map›Paper›PMID 23851683›Full record

ArticleJournal of immunology (Baltimore, Md. : 1950)2013

HLA-F and MHC-I open conformers cooperate in a MHC-I antigen cross-presentation pathway.

Jodie P Goodridge, Ni Lee, Aura Burian, Chul-Woo Pyo, Scott S Tykodi, Edus H Warren, Cassian Yee, Stanley R Riddell, Daniel E Geraghty

Open access · bronzeAbstract read
In one paragraph

Article in Journal of immunology (Baltimore, Md. : 1950), 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 61 citations in OpenAlex.

  1. Trial
  2. Review
  3. Article
  4. Review
  5. Article
  6. Review
  7. Review
  8. Review
  9. Article
  10. Article
  11. Open MHC Class I Conformers: A Look through the Looking Glass.International journal of molecular sciences · 2021
    Review
  12. Article
  13. Review
  14. Article
  15. HLA polymorphism and tapasin independence influence outcomes of HIV and dengue virus infection.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Jodie P GoodridgeClinical Research Division, Fred Hutchinson Cancer Research Center, Seattle, WA 98109, USA.
Ni Lee
Aura Burian
Chul-Woo Pyo
Scott S Tykodi
Edus H Warren
Cassian Yee
Stanley R Riddell
Daniel E Geraghty
Fred Hutch Cancer Center · US

Funding

VIRUS-MEDIATED MYELOSUPPRESSIONP01CA018029 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI Geoffrey Roger HILL · 1985 to 2026
$128.4M
University of Washington/Fred Hutch Center for AIDS ResearchP30AI027757 · NIAID · UNIVERSITY OF WASHINGTON · PI Kenneth Sherr · 1988 to 2026
$104.9M
CD8+ T Cell Immunity to CytomegalovirusR01AI053193 · NIAID · FRED HUTCHINSON CANCER RESEARCH CENTER · PI RIDDELL, STANLEY R. · 2003 to 2013
$4.6M
HLA-E, F, G interactions &the immunology of pregnancyR01HD045813 · NICHD · FRED HUTCHINSON CANCER RESEARCH CENTER · PI GERAGHTY, DANIEL E. · 2004 to 2008
$1.9M
Potentiating Adoptive T Cell Therapy by ImmunomodulationR21CA128283 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI YEE, CASSIAN · 2007 to 2009
$936k
NCI NIH HHS CA128283NCI NIH HHS CA18029NCI NIH HHS P01 CA018029NCI NIH HHS R21 CA128283NIAID NIH HHS AI053193NIAID NIH HHS P30 AI027757NIAID NIH HHS R01 AI053193NICHD NIH HHS HD45813NICHD NIH HHS R01 HD045813
6 · The paper itself

Abstract

Peptides that are presented by MHC class I (MHC-I) are processed from two potential sources, as follows: newly synthesized endogenous proteins for direct presentation on the surface of most nucleated cells and exogenous proteins for cross-presentation typically by professional APCs. In this study, we present data that implicate the nonclassical HLA-F and open conformers of MHC-I expressed on activated cells in a pathway for the presentation of exogenous proteins by MHC-I. This pathway is distinguished from the conventional endogenous pathway by its independence from TAP and tapasin and its sensitivity to inhibitors of lysosomal enzymes, and further distinguished by its dependence on MHC-I allotype-specific epitope recognition for Ag uptake. Thus, our data from in vitro experiments collectively support a previously unrecognized model of Ag cross-presentation mediated by HLA-F and MHC-I open conformers on activated lymphocytes and monocytes, which may significantly contribute to the regulation of immune system functions and the immune defense.

Indexed as

Cross-PrimingModels, ImmunologicalAmino Acid SequenceAntigens, SurfaceAntigens, ViralB-LymphocytesCell Line, TumorEndosomesEnzyme InhibitorsEpitopesEpitopes, T-LymphocyteHistocompatibility Antigens Class IHumansKiller Cells, NaturalLymphocyte ActivationLymphocytesAntigens, SurfaceAntigens, ViralEnzyme InhibitorsEpitopesEpitopes, T-LymphocyteHistocompatibility Antigens Class IHLA-F antigensPeptide Fragments

Identifiers

PMID23851683
PMCPMC3732835
OpenAlexW2096225693

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.