Evidence map›Paper›PMID 23846695›Full record

ArticleThe Journal of biological chemistry2013

Structural model of the anion exchanger 1 (SLC4A1) and identification of transmembrane segments forming the transport site.

Damien Barneaud-Rocca, Catherine Etchebest, Hélène Guizouarn

Abstract read
In one paragraph

Article in The Journal of biological chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Ion Transport in Eryptosis, the Suicidal Death of Erythrocytes.Frontiers in cell and developmental biology · 2020
    Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Intercalated Cell Depletion and Vacuolar HJournal of the American Society of Nephrology : JASN · 2017
    Article
  14. Article
  15. Structure of Bor1 supports an elevator transport mechanism for SLC4 anion exchangers.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
  16. Article
  17. Article
  18. Solute carriers keep on rockin'.Nature structural & molecular biology · 2015
    Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Damien Barneaud-RoccaFrom the Université Nice Sophia Antipolis, Institut de Biologie Valrose, UMR7277, 06100 Nice, France.
Catherine Etchebest
Hélène Guizouarn

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The anion exchanger 1 (AE1), a member of bicarbonate transporter family SLC4, mediates an electroneutral chloride/bicarbonate exchange in physiological conditions. However, some point mutations in AE1 membrane-spanning domain convert the electroneutral anion exchanger into a Na(+) and K(+) conductance or induce a cation leak in a still functional anion exchanger. The molecular determinants that govern ion movement through this transporter are still unknown. The present study was intended to identify the ion translocation pathway within AE1. In the absence of a resolutive three-dimensional structure of AE1 membrane-spanning domain, in silico modeling combined with site-directed mutagenesis experiments was done. A structural model of AE1 membrane-spanning domain is proposed, and this model is based on the structure of a uracil-proton symporter. This model was used to design cysteine-scanning mutagenesis on transmembrane (TM) segments 3 and 5. By measuring AE1 anion exchange activity or cation leak, it is proposed that there is a unique transport site comprising TM3-5 and TM8 that should function as an anion exchanger and a cation leak.

Indexed as

Amino Acid SequenceAnimalsAnion Exchange Protein 1, ErythrocyteAnionsBinding SitesCell MembraneFemaleHumansLithiumModels, MolecularMolecular Sequence DataMutagenesis, Site-DirectedOocytesPoint MutationPotassiumProtein Structure, TertiaryAnion Exchange Protein 1, ErythrocyteAnionsLithiumPotassiumSLC4A1 protein, humanSodiumSulfhydryl CompoundsAnion Exchanger 1Anion TransportBand 3ErythrocyteHomology ModelingIon ChannelsProtein StructureSLC4A1

Identifiers

PMID23846695
PMCPMC3772184

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.