Evidence map›Paper›PMID 23842743›Full record

ArticleNeuromolecular medicine2013

Transcription factor SCIRR69 involved in the activation of brain-derived neurotrophic factor gene promoter II in mechanically injured neurons.

Yong Liu, Haiping Que, Zhenlian Ma, Shuguang Yang, Yanli Ni, Zhanpeng Luo, Ning Tang, Jingwen Yang, Shuqian Jing, Shaojun Liu

Abstract read
PubMed Publisher
In one paragraph

Article in Neuromolecular medicine, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.3field-weighted citation impact, top 47% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 6 citations in OpenAlex.

  1. Diverse Functions of MultipleBiomolecules · 2023
    Review
  2. Review
  3. Article
  4. Signaling Over Distances.Molecular & cellular proteomics : MCP · 2016
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Yong LiuState Key Laboratory of Proteomics, Department of Neurobiology, Institute of Basic Medical Sciences, Beijing, 100850, China.
Haiping Que
Zhenlian Ma
Shuguang Yang
Yanli Ni
Zhanpeng Luo
Ning Tang
Jingwen Yang
Shuqian Jing
Shaojun Liu
Beijing Proteome Research Center · CNInstitute of Physiology and Basic Medicine · RUInstitute of Basic Medical Sciences of the Chinese Academy of Medical Sciences

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The spinal cord injury and regeneration-related gene #69 (SCIRR69), which was identified in our screen for genes upregulated after spinal cord injury, encode a protein belonging to the cAMP response element-binding protein (CREB)/ATF family of transcription factors. Our previous study showed that SCIRR69 functions as a transcriptional activator. However, the target gene regulated by SCIRR69 and its roles in injured neurons remain unknown. In this study, we showed that SCIRR69 is widely distributed in the central nervous system. Full-length SCIRR69 is an endoplasmic reticulum-bound protein. Following mechanical injury to neurons, SCIRR69 was induced and proteolytically cleaved by site-1 and site-2 proteases, and the proteolytically cleaved SCIRR69 (p60-SCIRR69) was translocated to the nucleus where it bound to brain-derived neurotrophic factor (BDNF) gene promoter II. In addition, loss- and gain-of-function studies confirmed that SCIRR69 is involved in the regulation of BDNF expression in injured neurons. As expected, the culture supernatants of PC12 cells stably expressing p60-SCIRR69 contained higher levels of BDNF, and more remarkably promoted neurite outgrowth in a spinal cord slice culture model in vitro than the supernatants of control cells. These results suggest that SCIRR69 is a novel regulator of the BDNF gene and may play an important role in the repair and/or regeneration of damaged neural tissues by specifically activating BDNF promoter II.

Indexed as

Amino Acid MotifsAmino Acid SequenceAnimalsBase SequenceBrain-Derived Neurotrophic FactorConsensus SequenceMiceMolecular Sequence DataNeuritesNeuronsPC12 CellsPromoter Regions, GeneticRatsRats, WistarRecombinant Fusion ProteinsRNA InterferenceBrain-Derived Neurotrophic FactorCreb3l2 protein, ratRecombinant Fusion ProteinsRNA, Small InterferingTranscription Factors

Identifiers

PMID23842743
OpenAlexW1995843322

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.