Evidence map›Paper›PMID 23840564›Full record

ArticlePloS one2013

Assessment of SLX4 Mutations in Hereditary Breast Cancers.

Sohela Shah, Yonghwan Kim, Irina Ostrovnaya, Rajmohan Murali, Kasmintan A Schrader, Francis P Lach, Kara Sarrel, Rohini Rau-Murthy, Nichole Hansen, Liyng Zhang and 6 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 50 citations in OpenAlex.

  1. International journal of molecular sciences · 2026
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  7. Mechanisms of Resistance to Antibody-Drug Conjugates.International journal of molecular sciences · 2023
    Review
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  19. Deleterious Mutations in DNA Repair GeneFrontiers in oncology · 2019
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 3 institutions in 1 country.

Sohela ShahClinical Genetics Service, Department of Medicine, Memorial Sloan-Kettering Cancer Center, New York, New York, United States of America.
Yonghwan Kim
Irina Ostrovnaya
Rajmohan Murali
Kasmintan A Schrader
Francis P Lach
Kara Sarrel
Rohini Rau-Murthy
Nichole Hansen
Liyng Zhang
Tomas Kirchhoff
Zsofia Stadler
Mark Robson
Joseph Vijai
Kenneth Offit
Agata Smogorzewska
Memorial Sloan Kettering Cancer Center · USRockefeller University · USCornell University · US

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Elisa de Stanchina · 1985 to 2026
$347.4M
NCI NIH HHS P30 CA008748
6 · The paper itself

Abstract

backgroundSLX4 encodes a DNA repair protein that regulates three structure-specific endonucleases and is necessary for resistance to DNA crosslinking agents, topoisomerase I and poly (ADP-ribose) polymerase (PARP) inhibitors. Recent studies have reported mutations in SLX4 in a new subtype of Fanconi anemia (FA), FA-P. Monoallelic defects in several FA genes are known to confer susceptibility to breast and ovarian cancers. METHODS AND

resultsTo determine if SLX4 is involved in breast cancer susceptibility, we sequenced the entire SLX4 coding region in 738 (270 Jewish and 468 non-Jewish) breast cancer patients with 2 or more family members affected by breast cancer and no known BRCA1 or BRCA2 mutations. We found a novel nonsense (c.2469G>A, p.W823*) mutation in one patient. In addition, we also found 51 missense variants [13 novel, 23 rare (MAF<0.1%), and 15 common (MAF>1%)], of which 22 (5 novel and 17 rare) were predicted to be damaging by Polyphen2 (score = 0.65-1). We performed functional complementation studies using p.W823* and 5 SLX4 variants (4 novel and 1 rare) cDNAs in a human SLX4-null fibroblast cell line, RA3331. While wild type SLX4 and all the other variants fully rescued the sensitivity to mitomycin C (MMC), campthothecin (CPT), and PARP inhibitor (Olaparib) the p.W823* SLX4 mutant failed to do so.

conclusionLoss-of-function mutations in SLX4 may contribute to the development of breast cancer in very rare cases.

Indexed as

MutationAdultAgedAged, 80 and overBase SequenceBreast NeoplasmsCell LineDNA Mutational AnalysisGenetic Predisposition to DiseaseHumansMiddle AgedRecombinasesYoung AdultRecombinasesSLX4 protein, human

Identifiers

PMID23840564
PMCPMC3694110
OpenAlexW2073381292

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.