ArticlePloS one2013
A TILLING Platform for Functional Genomics in Brachypodium distachyon.
Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.
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Who cites it
41 citing papers in PubMed.
- Culmorin inhibits detoxification of the mycotoxin deoxynivalenol by plant UDP-glucosyltransferases.Journal of experimental botany · 2026Article
- Several groups of LysM-RLKs are involved in symbiotic signal perception and arbuscular mycorrhiza establishment.Nature communications · 2025Article
- BdNRT2A and BdNRT3.2 Are the Major Components of the High-Affinity Nitrate Transport System inPlant direct · 2025Article
- Exploring Lignin Biosynthesis Genes in Rice: Evolution, Function, and Expression.International journal of molecular sciences · 2024Article
- The H3K4 demethylase JMJ1 is required for proper timing of flowering in Brachypodium distachyon.The Plant cell · 2024Article
- Transposition of HOPPLA in siRNA-deficient plants suggests a limited effect of the environment on retrotransposon mobility in Brachypodium distachyon.PLoS genetics · 2024Article
- Article
- PHYTOCHROME C regulation of photoperiodic flowering via PHOTOPERIOD1 is mediated by EARLY FLOWERING 3 in Brachypodium distachyon.PLoS genetics · 2023Article
- Mixed-Linkage Glucan Is the Main Carbohydrate Source and Starch Is an Alternative Source during Brachypodium Grain Germination.International journal of molecular sciences · 2023Article
- Identification and analysis of lignin biosynthesis genes related to fruit ripening and stress response in banana (Frontiers in plant science · 2023Article
- Construction and analysis of a Noccaea caerulescens TILLING population.BMC plant biology · 2022Article
- Brachypodium distachyon UNICULME4 and LAXATUM-A are redundantly required for development.Plant physiology · 2022Article
- Stacking AsFMT overexpression with BdPMT loss of function enhances monolignol ferulate production in Brachypodium distachyon.Plant biotechnology journal · 2021Article
- DNA Methylation-An Epigenetic Mark in Mutagen-TreatedPlants (Basel, Switzerland) · 2021Article
- BdERECTA controls vasculature patterning and phloem-xylem organization in Brachypodium distachyon.BMC plant biology · 2021Article
- Overexpression of a Cytochrome P450 Monooxygenase Involved in Orobanchol Biosynthesis Increases Susceptibility to Fusarium Head Blight.Frontiers in plant science · 2021Article
- COMPOSITUM 1 contributes to the architectural simplification of barley inflorescence via meristem identity signals.Nature communications · 2020Article
- Insertional mutagenesis of Brachypodium distachyon using the Tnt1 retrotransposable element.The Plant journal : for cell and molecular biology · 2020Article
- Characterisation of Cellulose Synthase Like F6 (Frontiers in plant science · 2020Article
- Genetic Variation for Seed Metabolite Levels inInternational journal of molecular sciences · 2019Article
Corrections and comments
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Authors and funding
17 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The new model plant for temperate grasses, Brachypodium distachyon offers great potential as a tool for functional genomics. We have established a sodium azide-induced mutant collection and a TILLING platform, called "BRACHYTIL", for the inbred line Bd21-3. The TILLING collection consists of DNA isolated from 5530 different families. Phenotypes were reported and organized in a phenotypic tree that is freely available online. The tilling platform was validated by the isolation of mutants for seven genes belonging to multigene families of the lignin biosynthesis pathway. In particular, a large allelic series for BdCOMT6, a caffeic acid O-methyl transferase was identified. Some mutants show lower lignin content when compared to wild-type plants as well as a typical decrease of syringyl units, a hallmark of COMT-deficient plants. The mutation rate was estimated at one mutation per 396 kb, or an average of 680 mutations per line. The collection was also used to assess the Genetically Effective Cell Number that was shown to be at least equal to 4 cells in Brachypodium distachyon. The mutant population and the TILLING platform should greatly facilitate functional genomics approaches in this model organism.
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