Evidence map›Paper›PMID 23840004›Full record

ArticleGlia2013

Expression profiling of Aldh1l1-precursors in the developing spinal cord reveals glial lineage-specific genes and direct Sox9-Nfe2l1 interactions.

Anna V Molofsky, Stacey M Glasgow, Lesley S Chaboub, Hui-Hsin Tsai, Alice T Murnen, Kevin W Kelley, Stephen P J Fancy, Tracy J Yuen, Lohith Madireddy, Sergio Baranzini and 3 more

Abstract read
In one paragraph

Article in Glia, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed.

  1. Trial
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Astrocyte Development in the Rodent.Advances in neurobiology · 2024
    Review
  10. Article
  11. Article
  12. Article
  13. Astrocyte development-More questions than answers.Frontiers in cell and developmental biology · 2023
    Review
  14. Review
  15. SOX9 in organogenesis: shared and unique transcriptional functions.Cellular and molecular life sciences : CMLS · 2022
    Review
  16. Review
  17. Article
  18. Decoding Cortical Glial Cell Development.Neuroscience bulletin · 2021
    Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Anna V MolofskyDepartment of Pediatrics, Eli and Edythe Broad Center of Regeneration Medicine and Stem Cell Research, University of California San Francisco, 513 Parnassus Avenue, San Francisco, California 94143, USA.
Stacey M Glasgow
Lesley S Chaboub
Hui-Hsin Tsai
Alice T Murnen
Kevin W Kelley
Stephen P J Fancy
Tracy J Yuen
Lohith Madireddy
Sergio Baranzini
Benjamin Deneen
David H Rowitch
Michael C Oldham

Funding

Tumor BiologyP30CA125123 · NCI · BAYLOR COLLEGE OF MEDICINE · PI DAVID R ROWLEY · 2007 to 2026
$73.9M
MEDICAL SCIENTIST TRAINING PROGRAMT32GM007618 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI ANDERSON, MARK S · 1985 to 2020
$29.6M
Training In Cell and Gene TherapyT32HL092332 · NHLBI · BAYLOR COLLEGE OF MEDICINE · PI MALCOLM K. BRENNER, Bruno Di Stefano · 2008 to 2026
$6.9M
TRAINING THE NEXT GENERATION OF MENTAL HEALTH RESEARCHERSR25MH060482 · NIMH · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI DANIEL H MATHALON, Susan M. Voglmaier · 2000 to 2026
$5.2M
Transcriptional regulation of gliogenesis in the CNSR01NS071153 · NINDS · BAYLOR COLLEGE OF MEDICINE · PI DENEEN, BENJAMIN · 2010 to 2022
$5.0M
Cellular and Genetic Origins of AstrocytesR01NS059893 · NINDS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI ROWITCH, DAVID H · 2008 to 2012
$3.8M
Neurobiological Mechanisms Underlying the Symptoms and Course of SchizophreniaT32MH089920 · NIMH · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI FORD, JUDITH M · 2010 to 2014
$1.3M
Investigating Astrocyte Diversity and Function in Midbrain Dopaminergic CircuitsR01MH099595 · NIMH · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI ULLIAN, ERIK M · 2013 to 2015
$826k
Howard Hughes Medical InstituteNCI NIH HHS P30 CA125123NHLBI NIH HHS 5-T32HL092332-08NHLBI NIH HHS T32 HL092332NIGMS NIH HHS T32 GM007618NIMH NIH HHS R01 MH099595NIMH NIH HHS R25 MH060482NIMH NIH HHS R25MH060482NIMH NIH HHS T32 MH089920NINDS NIH HHS R01 NS059893NINDS NIH HHS R01 NS071153
6 · The paper itself

Abstract

Developmental regulation of gliogenesis in the mammalian CNS is incompletely understood, in part due to a limited repertoire of lineage-specific genes. We used Aldh1l1-GFP as a marker for gliogenic radial glia and later-stage precursors of developing astrocytes and performed gene expression profiling of these cells. We then used this dataset to identify candidate transcription factors that may serve as glial markers or regulators of glial fate. Our analysis generated a database of developmental stage-related markers of Aldh1l1+ cells between murine embryonic day 13.5-18.5. Using these data we identify the bZIP transcription factor Nfe2l1 and demonstrate that it promotes glial fate under direct Sox9 regulatory control. Thus, this dataset represents a resource for identifying novel regulators of glial development.

Indexed as

Age FactorsAldehyde Dehydrogenase 1 FamilyAnimalsCell DifferentiationCells, CulturedChickensComputational BiologyElectroporationEmbryo, MammalianFlow CytometryGene Expression ProfilingGene Expression Regulation, DevelopmentalGlial Fibrillary Acidic ProteinGreen Fluorescent ProteinsIsoenzymesMiceAldehyde Dehydrogenase 1 FamilyALDH1A1 protein, mouseGlial Fibrillary Acidic ProteinGreen Fluorescent ProteinsIsoenzymesNerve Tissue ProteinsNfe2L1 protein, mouseNF-E2-Related Factor 1Retinal DehydrogenaseSox9 protein, mouseSOX9 Transcription FactorTranscription Factorsastrocytesexpression profilinggene coexpressiongliogenesisNfe2l1

Identifiers

PMID23840004
PMCPMC3909648

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.