Evidence map›Paper›PMID 23836929›Full record

ArticleThe Journal of cell biology2013

Degradation of high affinity HuD targets releases Kv1.1 mRNA from miR-129 repression by mTORC1.

Natasha M Sosanya, Peggy P C Huang, Luisa P Cacheaux, Chun Jung Chen, Kathleen Nguyen, Nora I Perrone-Bizzozero, Kimberly F Raab-Graham

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of cell biology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 84 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
84citing papers in PubMed, 1 pooled it
6.1field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

84 citing papers in PubMed, 1 synthesis or guideline pooled it, 119 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Review
  4. Article
  5. Article
  6. Article
  7. Small Differences and Big Changes: The Many Variables of MicroRNA Expression and Function in the Brain.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2024
    Review
  8. Review
  9. Anti-seizure gene therapy for focal cortical dysplasia.Brain : a journal of neurology · 2024
    Article
  10. Article
  11. Article
  12. MicroRNA-335-5p suppresses voltage-gated sodium channel expression and may be a target for seizure control.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Synergistic regulation ofRNA biology · 2021
    Article
  19. Genetic removal of p70 S6K1 corrects coding sequence length-dependent alterations in mRNA translation in fragile X syndrome mice.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  20. Review

24 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Natasha M SosanyaCenter for Learning and Memory, Section of Neurobiology, University of Texas at Austin, Austin, TX 78712, USA.
Peggy P C Huang
Luisa P Cacheaux
Chun Jung Chen
Kathleen Nguyen
Nora I Perrone-Bizzozero
Kimberly F Raab-Graham
The University of Texas at Austin · USTexas A&M Health Science Center · USUniversity of New Mexico · US

Funding

Mechanisms of Post-Transcriptional Control of Neuronal mRNAsR01NS030255 · NINDS · UNIVERSITY OF NEW MEXICO · PI PERRONE-BIZZOZERO, NORA IRMA · 1997 to 2011
$2.8M
Competing roles of microRNAs and RNA-binding proteins in drug addictionR01DA034097 · NIDA · UNIVERSITY OF NEW MEXICO HEALTH SCIS CTR · PI NEISEWANDER, JANET L, PERRONE-BIZZOZERO, NORA IRMA · 2012 to 2016
$2.2M
NIDA NIH HHS R01 DA034097NINDS NIH HHS 5R01-NS30255NINDS NIH HHS R01 NS030255
6 · The paper itself

Abstract

Little is known about how a neuron undergoes site-specific changes in intrinsic excitability during neuronal activity. We provide evidence for a novel mechanism for mTORC1 kinase-dependent translational regulation of the voltage-gated potassium channel Kv1.1 messenger RNA (mRNA). We identified a microRNA, miR-129, that repressed Kv1.1 mRNA translation when mTORC1 was active. When mTORC1 was inactive, we found that the RNA-binding protein, HuD, bound to Kv1.1 mRNA and promoted its translation. Unexpectedly, inhibition of mTORC1 activity did not alter levels of miR-129 and HuD to favor binding to Kv1.1 mRNA. However, reduced mTORC1 signaling caused the degradation of high affinity HuD target mRNAs, freeing HuD to bind Kv1.1 mRNA. Hence, mTORC1 activity regulation of mRNA stability and high affinity HuD-target mRNA degradation mediates the bidirectional expression of dendritic Kv1.1 ion channels.

Indexed as

ProteolysisAnimalsBinding SitesELAV-Like Protein 4ELAV ProteinsEnzyme ActivationHEK293 CellsHumansKv1.1 Potassium ChannelMechanistic Target of Rapamycin Complex 1MicroRNAsMultiprotein ComplexesNeuronal PlasticityNeuronsProtein BiosynthesisProteinsElavl4 protein, ratELAV-Like Protein 4ELAV ProteinsKcna1 protein, ratKv1.1 Potassium ChannelMechanistic Target of Rapamycin Complex 1MicroRNAsMultiprotein ComplexesProteinsRepressor ProteinsRNA, MessengerTOR Serine-Threonine Kinases

Identifiers

PMID23836929
PMCPMC3704988
OpenAlexW2102885253

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.