Evidence map›Paper›PMID 23835223›Full record

ArticleBiosensors & bioelectronics2013

Topography-assisted electromagnetic platform for blood-to-PCR in a droplet.

Chi-Han Chiou, Dong Jin Shin, Yi Zhang, Tza-Huei Wang

Abstract read
In one paragraph

Article in Biosensors & bioelectronics, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Magnetic Bead Manipulation in Microfluidic Chips for Biological Application.Cyborg and bionic systems (Washington, D.C.) · 2023
    Article
  9. Article
  10. Article
  11. Thermally Responsive Alkane Partitions for Assay Automation.ACS applied materials & interfaces · 2022
    Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Chi-Han ChiouDepartment of Mechanical Engineering, Johns Hopkins University, Baltimore, USA; ITRI South, Industrial Technology Research Institute, Tainan City, Taiwan.
Dong Jin Shin
Yi Zhang
Tza-Huei Wang

Funding

ValidationU54CA151838 · NCI · JOHNS HOPKINS UNIVERSITY · PI SEARSON, PETER C · 2010 to 2014
$11.9M
Multiplexed Detection of Cell Free DNA Biomarkers for CancerR01CA155305 · NCI · JOHNS HOPKINS UNIVERSITY · PI WANG, TZA-HUEI JEFF · 2011 to 2015
$1.7M
Nanobiosensing Method for Point Mutation Detection of CancerR21CA120742 · NCI · JOHNS HOPKINS UNIVERSITY · PI WANG, TZA-HUEI JEFF · 2008 to 2009
$387k
NCI NIH HHS R01 CA155305NCI NIH HHS R01CA155305NCI NIH HHS R21 CA120742NCI NIH HHS R21CA120742NCI NIH HHS U54 CA151838NCI NIH HHS U54CA151838
6 · The paper itself

Abstract

This paper presents an electromagnetically actuated platform for automated sample preparation and detection of nucleic acids. The proposed platform integrates nucleic acid extraction using silica-coated magnetic particles with real-time polymerase chain reaction (PCR) on a single cartridge. Extraction of genomic material was automated by manipulating magnetic particles in droplets using a series of planar coil electromagnets assisted by topographical features, enabling efficient fluidic processing over a variety of buffers and reagents. The functionality of the platform was demonstrated by performing nucleic acid extraction from whole blood, followed by real-time PCR detection of KRAS oncogene. Automated sample processing from whole blood to PCR-ready droplet was performed in 15 min. We took a modular approach of decoupling the modules of magnetic manipulation and optical detection from the device itself, enabling a low-complexity cartridge that operates in tandem with simple external instruments.

Indexed as

DNAElectromagnetic PhenomenaEquipment DesignHumansMagnetsMicrofluidic Analytical TechniquesProto-Oncogene ProteinsProto-Oncogene Proteins p21(ras)ras ProteinsReal-Time Polymerase Chain ReactionDNAKRAS protein, humanProto-Oncogene ProteinsProto-Oncogene Proteins p21(ras)ras ProteinsDroplet manipulationMicro-total-analysis systemReal-time PCRSolid-phase DNA extraction

Identifiers

PMID23835223
PMCPMC3895948

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.