Evidence map›Paper›PMID 23835087›Full record

ArticleTuberculosis (Edinburgh, Scotland)2013

Overexpression of the Rv0805 phosphodiesterase elicits a cAMP-independent transcriptional response.

Nishad Matange, Debbie M Hunt, Roger S Buxton, Sandhya S Visweswariah

Open access · hybridAbstract read
In one paragraph

Article in Tuberculosis (Edinburgh, Scotland), 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. eLife · 2024
    Article
  3. Article
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  8. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Nishad MatangeDepartment of Molecular Reproduction, Development and Genetics, Indian Institute of Science, Bangalore 560012, India.
Debbie M Hunt
Roger S Buxton
Sandhya S Visweswariah
Indian Institute of Science Bangalore · IN

Funding

Medical Research Council MC_U117585867Medical Research Council U117585867Wellcome Trust
6 · The paper itself

Abstract

The Rv0805 gene in Mycobacterium tuberculosis encodes a metallophosphoesterase which shows cAMP-hydrolytic activity. Overexpression of Rv0805 has been used as a tool to lower intracellular cAMP levels and thereby elucidate the roles of cAMP in mycobacteria. Here we show that levels of cAMP in M. tuberculosis were lowered by only ∼30% following overexpression of Rv0805, and transcript levels of a number of genes, which include those associated with virulence and the methyl citrate cycle, were altered. The genes that showed altered expression were distinct from those differentially regulated in a strain deleted for the cAMP-receptor protein (CRP(Mt)), consistent with the relatively low dependence on cAMP of CRP(Mt) binding to DNA. Using mutants of Rv0805 we show that the transcriptional signature of Rv0805 overexpression is a combination of catalysis-dependent and independent effects, and that the structurally flexible C-terminus of Rv0805 is crucial for the catalysis-independent effects of the protein. Our study demonstrates the dissociation of Rv0805 and cAMP-regulated gene expression, and reveals alternate functions for this phosphodiesterase from M. tuberculosis.

Indexed as

3',5'-Cyclic-AMP PhosphodiesterasesBacterial ProteinsCatalysisCyclic AMPCyclic AMP Receptor ProteinGene Expression Regulation, BacterialGene Knockout TechniquesGenes, BacterialHumansMycobacterium tuberculosisOligonucleotide Array Sequence AnalysisPromoter Regions, GeneticTranscription, GeneticTranscriptome3',5'-Cyclic-AMP PhosphodiesterasesBacterial ProteinsCyclic AMPCyclic AMP Receptor ProteinCyclic AMPMicroarrayMycobacterium tuberculosisPhosphodiesteraseRv0805

Identifiers

PMID23835087
PMCPMC3776917
OpenAlexW2125783519

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.