Evidence map›Paper›PMID 23835076›Full record

ReviewTrends in immunology2013

Mechanisms of peptide repertoire selection by HLA-DM.

Wouter Pos, Dhruv K Sethi, Kai W Wucherpfennig

Open access · greenAbstract readReview
In one paragraph

Review in Trends in immunology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 54 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Article
  6. Article
  7. Review
  8. Review
  9. Review
  10. Article
  11. Article
  12. Review
  13. Review
  14. Impact of HLA-DR Antigen Binding Cleft Rigidity on T Cell Recognition.International journal of molecular sciences · 2020
    Article
  15. Article
  16. Article
  17. Review
  18. HLA-DO Modulates the Diversity of the MHC-II Self-peptidome.Molecular & cellular proteomics : MCP · 2019
    Article
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Wouter PosDepartment of Cancer Immunology and AIDS, Dana-Farber Cancer Institute, Boston, MA 02115, USA.
Dhruv K Sethi
Kai W Wucherpfennig
Dana-Farber Cancer Institute · USHarvard University · US

Funding

TCR recognition of MHC class II peptide compexes in multiple sclerosisP01AI045757 · NIAID · DANA-FARBER CANCER INSTITUTE · PI KUCHROO, VIJAY K., LOVE, JOHN CHRISTOPHER · 1999 to 2017
$22.8M
Impact of MHC Genotype on Ex Vivo T cell Function in Type 1 DiabetesDP3DK097681 · NIDDK · DANA-FARBER CANCER INST · PI LOVE, JOHN CHRISTOPHER, WUCHERPFENNIG, KAI W · 2012 to 2012
$3.9M
Inhibition of Antigen Presentation in Multiple SclerosisR01NS044914 · NINDS · DANA-FARBER CANCER INSTITUTE · PI WUCHERPFENNIG, KAI W · 2003 to 2012
$3.2M
NIAID NIH HHS P01 AI045757NIDDK NIH HHS DP3 DK097681NINDS NIH HHS R01 NS044914
6 · The paper itself

Abstract

Recently, crystal structures of key complexes in antigen presentation have been reported. HLA-DM functions in antigen presentation by catalyzing dissociation of an invariant chain remnant from the peptide binding groove and stabilizing empty MHC class II proteins in a peptide-receptive conformation. The crystal structure of a MHC class II-HLA-DM complex explains how HLA-DM stabilizes an otherwise short-lived transition state and promotes a rapid peptide exchange process that favors the highest-affinity ligands. HLA-DO has sequence similarity with MHC class II molecules yet inhibits antigen presentation. The structure of the HLA-DO-HLA-DM complex shows that it blocks HLA-DM activity as a substrate mimic. Alterations in the efficiency of DM-mediated peptide selection may contribute to autoimmune pathologies, which will be an exciting area for future investigation.

Indexed as

AnimalsAntigen PresentationHistocompatibility Antigens Class IIHLA-D AntigensHumansPeptidesProtein BindingHistocompatibility Antigens Class IIHLA-D AntigensHLA-DM antigensPeptidesantigen presentationMHC class II molecules

Identifiers

PMID23835076
PMCPMC3796002
OpenAlexW1997532526

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.