Evidence map›Paper›PMID 23834437›Full record

ArticleACS chemical biology2013

A novel allosteric inhibitor of the uridine diphosphate N-acetylglucosamine pyrophosphorylase from Trypanosoma brucei.

Michael D Urbaniak, Iain T Collie, Wenxia Fang, Tonia Aristotelous, Susanne Eskilsson, Olawale G Raimi, Justin Harrison, Iva Hopkins Navratilova, Julie A Frearson, Daan M F van Aalten and 1 more

Abstract read
In one paragraph

Article in ACS chemical biology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 26 citations in OpenAlex.

  1. Article
  2. Article
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  4. Article
  5. Article
  6. A mechanism-inspired UDP-RSC chemical biology · 2020
    Article
  7. Identification ofMolecules (Basel, Switzerland) · 2019
    Article
  8. Review
  9. Article
  10. Review
  11. Characterization of parasite-specific indels and their proposed relevance for selective anthelminthic drug targeting.Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases · 2016
    Article
  12. Article
  13. Article
  14. Article
  15. Structure of uridine diphosphate N-acetylglucosamine pyrophosphorylase from Entamoeba histolytica.Acta crystallographica. Section F, Structural biology communications · 2015
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 1 institution in 1 country.

Michael D UrbaniakDivision of Biological Chemistry and Drug Discovery, ‡Division of Molecular Microbiology, and §MRC Protein Phosphorylation and Ubiquitylation Unit, College of Life Sciences, University of Dundee , Dundee DD1 5EH, U.K.
Iain T Collie
Wenxia Fang
Tonia Aristotelous
Susanne Eskilsson
Olawale G Raimi
Justin Harrison
Iva Hopkins Navratilova
Julie A Frearson
Daan M F van Aalten
Michael A J Ferguson
MRC Protein Phosphorylation and Ubiquitylation Unit · GB

Funding

Medical Research Council G0900138Wellcome Trust 077705Wellcome Trust 085622Wellcome Trust 087590WETP NIH HHS WT087590MA
6 · The paper itself

Abstract

Uridine diphosphate N-acetylglucosamine pyrophosphorylase (UAP) catalyzes the final reaction in the biosynthesis of UDP-GlcNAc, an essential metabolite in many organisms including Trypanosoma brucei, the etiological agent of Human African Trypanosomiasis. High-throughput screening of recombinant T. brucei UAP identified a UTP-competitive inhibitor with selectivity over the human counterpart despite the high level of conservation of active site residues. Biophysical characterization of the UAP enzyme kinetics revealed that the human and trypanosome enzymes both display a strictly ordered bi-bi mechanism, but with the order of substrate binding reversed. Structural characterization of the T. brucei UAP-inhibitor complex revealed that the inhibitor binds at an allosteric site absent in the human homologue that prevents the conformational rearrangement required to bind UTP. The identification of a selective inhibitory allosteric binding site in the parasite enzyme has therapeutic potential.

Indexed as

Allosteric RegulationCatalytic DomainHumansNucleotidyltransferasesProtein ConformationTrypanocidal AgentsTrypanosoma brucei bruceiTrypanosomiasis, AfricanUridine Diphosphate N-AcetylglucosamineNucleotidyltransferasesTrypanocidal AgentsUDPacetylglucosamine pyrophosphorylaseUridine Diphosphate N-Acetylglucosamine

Identifiers

PMID23834437
PMCPMC3780468
OpenAlexW2120569450

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.