Evidence map›Paper›PMID 23832240›Full record

ReviewNature reviews. Microbiology2013

Breaking and joining single-stranded DNA: the HUH endonuclease superfamily.

Michael Chandler, Fernando de la Cruz, Fred Dyda, Alison B Hickman, Gabriel Moncalian, Bao Ton-Hoang

Abstract readReview
In one paragraph

Review in Nature reviews. Microbiology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 170 papers.

0numbers the graph read from it
0cells of the map it votes in
170citing papers in PubMed
23.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

170 citing papers in PubMed, 279 citations in OpenAlex.

  1. Article
  2. Journal of virology · 2026
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  18. Mutational scanning of TnpB reveals latent activity for genome editing.bioRxiv : the preprint server for biology · 2025
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  19. Article
  20. Article

110 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 5 institutions in 3 countries.

Michael ChandlerLaboratoire de Microbiologie et Génétique Moléculaires, Centre National de la Recherche Scientifique, Toulouse Cedex, France. Michael.Chandler@ ibcg.biotoul.fr
Fernando de la Cruz
Fred Dyda
Alison B Hickman
Gabriel Moncalian
Bao Ton-Hoang
Centre National de la Recherche Scientifique · FRConsejo Superior de Investigaciones Científicas · ESNational Institute of Diabetes and Digestive and Kidney Diseases · USNational Institutes of Health · USUniversidad de Cantabria · ES

Funding

Structure and function of novel prokaryotic DNA transposasesZIADK036154 · NIDDK · NATIONAL INSTITUTE OF DIABETES AND DIGESTIVE AND KIDNEY DISEASES · PI DYDA, FREDERICK · 2009 to 2023
$7.7M
Understanding the structural basis of replication initiation in AAVZIADK036155 · NIDDK · NATIONAL INSTITUTE OF DIABETES AND DIGESTIVE AND KIDNEY DISEASES · PI DYDA, FREDERICK · 2009 to 2015
$2.9M
Intramural NIH HHS Z99 DK999999
6 · The paper itself

Abstract

HUH endonucleases are numerous and widespread in all three domains of life. The major function of these enzymes is processing a range of mobile genetic elements by catalysing cleavage and rejoining of single-stranded DNA using an active-site Tyr residue to make a transient 5'-phosphotyrosine bond with the DNA substrate. These enzymes have a key role in rolling-circle replication of plasmids and bacteriophages, in plasmid transfer, in the replication of several eukaryotic viruses and in various types of transposition. They have also been appropriated for cellular processes such as intron homing and the processing of bacterial repeated extragenic palindromes. Here, we provide an overview of these fascinating enzymes and their functions, using well-characterized examples of Rep proteins, relaxases and transposases, and we explore the molecular mechanisms used in their diverse activities.

Indexed as

DNA ReplicationBacteriaBacterial ProteinsBacteriophagesConjugation, GeneticDependovirusDNA, BacterialDNA, CircularDNA, Single-StrandedDNA Transposable ElementsDNA, ViralEndonucleasesPlasmidsProtein Structure, TertiaryViral ProteinsVirus ReplicationBacterial ProteinsDNA, BacterialDNA, CircularDNA, Single-StrandedDNA Transposable ElementsDNA, ViralEndonucleasesViral Proteins

Identifiers

PMID23832240
PMCPMC6493337
OpenAlexW1974231532

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.