Evidence map›Paper›PMID 23831583›Full record

ArticleJournal of inorganic biochemistry2013

Porphyrin π-stacking in a heme protein scaffold tunes gas ligand affinity.

Emily E Weinert, Christine M Phillips-Piro, Michael A Marletta

Abstract read
In one paragraph

Article in Journal of inorganic biochemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.5field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Differential ligand-selective control of opposing enzymatic activities within a bifunctional c-di-GMP enzyme.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  5. Article
  6. A novel thermophilic hemoprotein scaffold for rational design of biocatalysts.Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry · 2018
    Article
  7. Article
  8. Bacterial Haemoprotein Sensors of NO: H-NOX and NosP.Advances in microbial physiology · 2017
    Review
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 3 institutions in 1 country.

Emily E WeinertDepartment of Chemistry, Emory University, Atlanta, GA 30322, United States.
Christine M Phillips-Piro
Michael A Marletta
Emory University · USFranklin & Marshall College · USUniversity of California, Berkeley · US

Funding

Heme Protein Sensors in ProkaryotesR01GM070671 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI MARLETTA, MICHAEL A. · 2005 to 2008
$1.2M
Engineering H-NOX Domains for Therapeutic Oxygen DeliveryF32HL090174 · NHLBI · UNIVERSITY OF CALIFORNIA BERKELEY · PI WEINERT, EMILY E · 2007 to 2009
$148k
NHLBI NIH HHS F32 HL090174NIGMS NIH HHS GM 070671NIGMS NIH HHS R01 GM070671PHS HHS F32L090174
6 · The paper itself

Abstract

The role of π-stacking in controlling redox and ligand binding properties of porphyrins has been of interest for many years. The recent discovery of H-NOX domains has provided a model system to investigate the role of porphyrin π-stacking within a heme protein scaffold. Removal of a phenylalanine-porphyrin π-stack dramatically increased O2, NO, and CO affinities and caused changes in redox potential (~40mV) without any structural changes. These results suggest that small changes in redox potential affect ligand affinity and that π-stacking may provide a novel route to engineer heme protein properties for new functions.

Indexed as

Carbon DioxideCarbon MonoxideHemeproteinsLigandsModels, MolecularOxidation-ReductionOxygenPorphyrinsCarbon DioxideCarbon MonoxideHemeproteinsLigandsOxygenPorphyrinsBioinorganic chemistryHeme proteinsH-NOXPi interactionsPorphyrinsRedox chemistry

Identifiers

PMID23831583
PMCPMC3773300
OpenAlexW2071379719

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.