Evidence map›Paper›PMID 23831117›Full record

ArticleJournal of hepatology2013

The AMPK-related kinase SNARK regulates hepatitis C virus replication and pathogenesis through enhancement of TGF-β signaling.

Kaku Goto, Wenyu Lin, Leiliang Zhang, Nikolaus Jilg, Run-Xuan Shao, Esperance A K Schaefer, Hong Zhao, Dahlene N Fusco, Lee F Peng, Naoya Kato and 1 more

Open access · greenAbstract read
In one paragraph

Article in Journal of hepatology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 31 citations in OpenAlex.

  1. Article
  2. Article
  3. Advances in the Use of Metformin for Liver Disease.Current medicinal chemistry · 2025
    Review
  4. Article
  5. Review
  6. AMPKα-like proteins as LKB1 downstream targets in cell physiology and cancer.Journal of molecular medicine (Berlin, Germany) · 2021
    Review
  7. Review
  8. Article
  9. Article
  10. Article
  11. AMP-Activated Protein Kinase and Host Defense against Infection.International journal of molecular sciences · 2018
    Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. MICA SNPs and the NKG2D system in virus-induced HCC.Journal of gastroenterology · 2015
    Review
  19. Diabetes and Hepatitis C: A Two-Way Association.Frontiers in endocrinology · 2015
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 2 countries.

Kaku GotoGastrointestinal Unit, Department of Medicine, Massachusetts General Hospital, Harvard Medical School, Boston, MA 02114, USA; The Advanced Clinical Research Center, The Institute of Medical Science, The University of Tokyo, Tokyo 108-8639, Japan; Japan Society for the Promotion of Science, Tokyo 102-8472, Japan.
Wenyu Lin
Leiliang Zhang
Nikolaus Jilg
Run-Xuan Shao
Esperance A K Schaefer
Hong Zhao
Dahlene N Fusco
Lee F Peng
Naoya Kato
Raymond T Chung
Massachusetts General Hospital · USHarvard University · USJapan Society for the Promotion of Science · JPThe University of Tokyo · JP

Funding

Virology CoreU19AI082630 · NIAID · MASSACHUSETTS GENERAL HOSPITAL · PI GEORG Michael LAUER · 2009 to 2026
$48.1M
HIV-Hepatitis C Virus Cooperative Interactions and Liver Disease ProgressionR01DK098079 · NIDDK · MASSACHUSETTS GENERAL HOSPITAL · PI CHUNG, RAYMOND T · 2013 to 2016
$2.7M
HIV-Hepatitis C Virus Interactions and PathogenesisR01AI069939 · NIAID · MASSACHUSETTS GENERAL HOSPITAL · PI CHUNG, RAYMOND T · 2006 to 2010
$1.9M
Patient-Oriented Research on Hepatitis in Special PopulationsK24DK078772 · NIDDK · MASSACHUSETTS GENERAL HOSPITAL · PI CHUNG, RAYMOND T · 2007 to 2016
$1.6M
NIAID NIH HHS AI069939NIAID NIH HHS AI082630NIAID NIH HHS R01 AI069939NIAID NIH HHS U19 AI082630NIDDK NIH HHS DK078772NIDDK NIH HHS K24 DK078772NIDDK NIH HHS R01 DK098079
6 · The paper itself

Abstract

BACKGROUND &

aimsHepatitis C virus (HCV) is a major cause of chronic liver disease worldwide. The biological and therapeutic importance of host cellular cofactors for viral replication has been recently appreciated. Here we examined the roles of SNF1/AMP kinase-related kinase (SNARK) in HCV replication and pathogenesis.

methodsThe JFH1 infection system and the full-length HCV replicon OR6 cell line were used. Gene expression was knocked down by siRNAs. SNARK mutants were created by site-directed mutagenesis. Intracellular mRNA levels were measured by qRT-PCR. Endogenous and overexpressed proteins were detected by Western blot analysis and immunofluorescence. Transforming growth factor (TGF)-β signaling was monitored by a luciferase reporter construct. Liver biopsy samples from HCV-infected patients were analyzed for SNARK expression.

resultsKnockdown of SNARK impaired viral replication, which was rescued by wild type SNARK but not by unphosphorylated or kinase-deficient mutants. Knockdown and overexpression studies demonstrated that SNARK promoted TGF-β signaling in a manner dependent on both its phosphorylation and kinase activity. In turn, chronic HCV replication upregulated the expression of SNARK in patients. Further, the SNARK kinase inhibitor metformin suppressed both HCV replication and SNARK-mediated enhancement of TGF-β signaling.

conclusionsThus reciprocal regulation between HCV and SNARK promotes TGF-β signaling, a major driver of hepatic fibrogenesis. These findings suggest that SNARK will be an attractive target for the design of novel host-directed antiviral and antifibrotic drugs.

Indexed as

BiopsyCell LineGene Expression RegulationHepacivirusHepatitis CHumansLiverMetforminProtein Kinase InhibitorsProtein Serine-Threonine KinasesRNA, Small InterferingSignal TransductionTransforming Growth Factor betaVirus ReplicationMetforminNUAK2 protein, humanProtein Kinase InhibitorsProtein Serine-Threonine KinasesRNA, Small InterferingTransforming Growth Factor betaCsAcyclosporin AFibrosisHCCHCVhepatocellular carcinomahost-targeting antiviralsHTAsJapanese fulminant hepatitis 1JFH1KinaseMetforminNUAK2SMADSNARKsucrose-non-fermenting protein kinase 1/AMP-activated protein kinase-related protein kinasesustained virological responseSVRTGF-betaTGF-βtransforming growth factor beta

Identifiers

PMID23831117
PMCPMC3866804
OpenAlexW2142686308

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.