Evidence map›Paper›PMID 23831028›Full record

ArticleCell reports2013

Dido3 PHD modulates cell differentiation and division.

Jovylyn Gatchalian, Agnes Fütterer, Scott B Rothbart, Qiong Tong, Hector Rincon-Arano, Ainhoa Sánchez de Diego, Mark Groudine, Brian D Strahl, Carlos Martínez-A, Karel H M van Wely and 1 more

Open access · goldAbstract read
In one paragraph

Article in Cell reports, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 49 papers.

0numbers the graph read from it
0cells of the map it votes in
49citing papers in PubMed
9.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

49 citing papers in PubMed, 67 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. A multivalent engagement of ENL with MOZ.Nature structural & molecular biology · 2025
    Article
  10. Guiding the HBO1 complex function through the JADE subunit.Nature structural & molecular biology · 2024
    Article
  11. Article
  12. Article
  13. MLL4 binds TET3.Structure (London, England : 1993) · 2024
    Article
  14. DIDO is necessary for the adipogenesis that promotes diet-induced obesity.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  15. Article
  16. Article
  17. Article
  18. Differences and similarities in recognition of co-factors by Taf14.Biochimica et biophysica acta. Gene regulatory mechanisms · 2023
    Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 2 countries.

Jovylyn GatchalianDepartment of Pharmacology, University of Colorado School of Medicine, Aurora, CO 80045, USA.
Agnes Fütterer
Scott B Rothbart
Qiong Tong
Hector Rincon-Arano
Ainhoa Sánchez de Diego
Mark Groudine
Brian D Strahl
Carlos Martínez-A
Karel H M van Wely
Tatiana G Kutateladze
Centro Nacional de Biotecnología · ESUniversity of Colorado Denver · USUniversity of North Carolina at Chapel Hill · USFred Hutch Cancer Center · USUniversity of Washington · US

Funding

Integrated Training in Cancer Model SystemsT32CA009156 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI DER, CHANNING J. · 1985 to 2020
$19.7M
MAINTENANCE OF GENE EXPRESSION IN THE RED CELL LINEAGER01HL065440 · NHLBI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI GROUDINE, MARK T · 2000 to 2018
$12.4M
PREDOCTORAL TRAINING PROGRAM IN PHARMACOLOGYT32GM007635 · NIGMS · UNIVERSITY OF COLORADO DENVER · PI DELL'ACQUA, MARK L · 1985 to 2023
$6.1M
Role of Set2 and H3 methylation in chromatin functionR01GM068088 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI STRAHL, BRIAN D · 2003 to 2017
$3.4M
Molecular analysis of methylated p53R01GM101664 · NIGMS · UNIVERSITY OF COLORADO DENVER · PI KUTATELADZE, TATIANA G · 2013 to 2016
$1.7M
Molecular analysis of CHD4R01GM096863 · NIGMS · UNIVERSITY OF COLORADO DENVER · PI KUTATELADZE, TATIANA G · 2011 to 2014
$1.4M
Role of Polycomblike1-histone interaction in PRC2 activitiesF31CA189487 · NCI · UNIVERSITY OF COLORADO DENVER · PI GATCHALIAN, JOVYLYN · 2014 to 2016
$70k
NCI NIH HHS F31 CA189487NCI NIH HHS T32 CA009156NCI NIH HHS T32CA09156NHLBI NIH HHS HL65440NHLBI NIH HHS R01 HL065440NIGMS NIH HHS GM068088NIGMS NIH HHS GM096863NIGMS NIH HHS GM101664NIGMS NIH HHS R01 GM068088NIGMS NIH HHS R01 GM096863NIGMS NIH HHS R01 GM101664NIGMS NIH HHS T32 GM007635
6 · The paper itself

Abstract

Death Inducer Obliterator 3 (Dido3) is implicated in the maintenance of stem cell genomic stability and tumorigenesis. Here, we show that Dido3 regulates the expression of stemness genes in embryonic stem cells through its plant homeodomain (PHD) finger. Binding of Dido3 PHD to histone H3K4me3 is disrupted by threonine phosphorylation that triggers Dido3 translocation from chromatin to the mitotic spindle. The crystal structure of Dido3 PHD in complex with H3K4me3 reveals an atypical aromatic-cage-like binding site that contains a histidine residue. Biochemical, structural, and mutational analyses of the binding mechanism identified the determinants of specificity and affinity and explained the inability of homologous PHF3 to bind H3K4me3. Together, our findings reveal a link between the transcriptional control in embryonic development and regulation of cell division.

Indexed as

Cell DifferentiationMitosisAmino Acid SequenceAnimalsBinding SitesCell Line, TumorDNA-Binding ProteinsEmbryonic Stem CellsHistonesHumansMiceMolecular Docking SimulationMolecular Sequence DataMutationPhosphorylationProtein Structure, TertiaryDido protein, mouseDNA-Binding ProteinsHistonesTranscription Factors

Identifiers

PMID23831028
PMCPMC3967714
OpenAlexW2085788675

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.