Evidence map›Paper›PMID 23828199›Full record

ArticleThe Journal of biological chemistry2013

Transcriptional properties of mammalian elongin A and its role in stress response.

Junya Kawauchi, Makoto Inoue, Mizue Fukuda, Yohei Uchida, Takashi Yasukawa, Ronald C Conaway, Joan W Conaway, Teijiro Aso, Shigetaka Kitajima

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
0.4field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 31 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Structure of the transcribing RNA polymerase II-Elongin complex.Nature structural & molecular biology · 2023
    Article
  5. Article
  6. Article
  7. Elongin functions as a loading factor for Mediator at ATF6α-regulated ER stress response genes.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  8. Review
  9. Review
  10. Review
  11. Review
  12. Lysine methylation signaling of non-histone proteins in the nucleus.Cellular and molecular life sciences : CMLS · 2019
    Review
  13. Article
  14. Def1 interacts with TFIIH and modulates RNA polymerase II transcription.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Junya KawauchiDepartment of Biochemical Genetics, Medical Research Institute, Tokyo Medical and Dental University, Tokyo 113-8510, Japan.
Makoto Inoue
Mizue Fukuda
Yohei Uchida
Takashi Yasukawa
Ronald C Conaway
Joan W Conaway
Teijiro Aso
Shigetaka Kitajima
Tokyo Medical and Dental University · JPKōchi University · JPStowers Institute for Medical Research · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Elongin A was shown previously to be capable of potently activating the rate of RNA polymerase II (RNAPII) transcription elongation in vitro by suppressing transient pausing by the enzyme at many sites along DNA templates. The role of Elongin A in RNAPII transcription in mammalian cells, however, has not been clearly established. In this report, we investigate the function of Elongin A in RNAPII transcription. We present evidence that Elongin A associates with the IIO form of RNAPII at sites of newly transcribed RNA and is relocated to dotlike domains distinct from those containing RNAPII when cells are treated with the kinase inhibitor 5,6-dichloro-1-β-d-ribofuranosylbenzimidazole. Significantly, Elongin A is required for maximal induction of transcription of the stress response genes ATF3 and p21 in response to several stimuli. Evidence from structure-function studies argues that Elongin A transcription elongation activity, but not its ubiquitination activity, is most important for its function in induction of transcription of ATF3 and p21. Taken together, our data provide new insights into the function of Elongin A in RNAPII transcription and bring to light a previously unrecognized role for Elongin A in the regulation of stress response genes.

Indexed as

Activating Transcription Factor 3AnimalsDichlororibofuranosylbenzimidazoleElonginEnzyme InhibitorsHeLa CellsHumansMiceRatsRNA Polymerase IIStress, PhysiologicalTranscription FactorsTranscription Initiation, GeneticActivating Transcription Factor 3ATF3 protein, humanAtf3 protein, mouseAtf3 protein, ratDichlororibofuranosylbenzimidazoleELOA protein, humanEloa protein, mouseEloa protein, ratElonginEnzyme InhibitorsRNA Polymerase IITranscription FactorsATF3Elongin AGene RegulationMammalRNA Polymerase IIStress ResponseTranscription Elongation Factors

Identifiers

PMID23828199
PMCPMC3750133
OpenAlexW2091192140

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.