Evidence map›Paper›PMID 23826149›Full record

ArticlePloS one2013

Unraveling the activation mechanism of the potato tuber ADP-glucose pyrophosphorylase.

Carlos M Figueroa, Misty L Kuhn, Christine A Falaschetti, Ligin Solamen, Kenneth W Olsen, Miguel A Ballicora, Alberto A Iglesias

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.5field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Carlos M FigueroaInstituto de Agrobiotecnología del Litoral, Universidad Nacional del Litoral and Consejo Nacional de Investigaciones Científicas y Técnicas, Santa Fe, Santa Fe, Argentina.
Misty L Kuhn
Christine A Falaschetti
Ligin Solamen
Kenneth W Olsen
Miguel A Ballicora
Alberto A Iglesias
Loyola University Chicago · USNational University of the Littoral · AR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

ADP-glucose pyrophosphorylase regulates the synthesis of glycogen in bacteria and of starch in plants. The enzyme from plants is mainly activated by 3-phosphoglycerate and is a heterotetramer comprising two small and two large subunits. Here, we found that two highly conserved residues are critical for triggering the activation of the potato tuber ADP-glucose pyrophosphorylase, as shown by site-directed mutagenesis. Mutations in the small subunit, which bears the catalytic function in this potato tuber form, had a more dramatic effect on disrupting the allosteric activation than those introduced in the large subunit, which is mainly modulatory. Our results strongly agree with a model where the modified residues are located in loops responsible for triggering the allosteric activation signal for this enzyme, and the sensitivity to this activation correlates with the dynamics of these loops. In addition, previous biochemical data indicates that the triggering mechanism is widespread in the enzyme family, even though the activator and the quaternary structure are not conserved.

Indexed as

Amino Acid SequenceEnzyme ActivationGlucose-1-Phosphate AdenylyltransferaseGlyceric AcidsKineticsMolecular Dynamics SimulationMolecular Sequence DataMutant ProteinsMutationPlant TubersProtein SubunitsSolanum tuberosumStructure-Activity RelationshipSubstrate SpecificityTryptophan3-phosphoglycerateGlucose-1-Phosphate AdenylyltransferaseGlyceric AcidsMutant ProteinsProtein SubunitsTryptophan

Identifiers

PMID23826149
PMCPMC3691274
OpenAlexW2028515125

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.