Evidence map›Paper›PMID 23825958›Full record

Trial reportPLoS pathogens2013

Host factor SAMHD1 restricts DNA viruses in non-dividing myeloid cells.

Joseph A Hollenbaugh, Peter Gee, Jonathon Baker, Michele B Daly, Sarah M Amie, Jessica Tate, Natsumi Kasai, Yuka Kanemura, Dong-Hyun Kim, Brian M Ward and 2 more

Open access · goldAbstract readClinical Trial
In one paragraph

Trial report in PLoS pathogens, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 113 papers.

0numbers the graph read from it
0cells of the map it votes in
113citing papers in PubMed
6.6field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

113 citing papers in PubMed, 163 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Viral Live-Attenuated Vaccines (LAVs): Past and Future Directions.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2025
    Review
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Review
  16. Article
  17. Article
  18. Review
  19. Article
  20. Review

53 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 3 countries.

Joseph A HollenbaughDepartment of Microbiology and Immunology, University of Rochester, Rochester, New York, United States of America.
Peter Gee
Jonathon Baker
Michele B Daly
Sarah M Amie
Jessica Tate
Natsumi Kasai
Yuka Kanemura
Dong-Hyun Kim
Brian M Ward
Yoshio Koyanagi
Baek Kim
University of Rochester · USKyoto University · JPEmory University · USKyung Hee University · KR

Funding

Replication fidelity and lentiviral pathogenesisR01AI049781 · NIAID · UNIVERSITY OF ROCHESTER · PI KIM, BAEK · 2002 to 2016
$4.9M
Training in Cellular, Biochemical and Molecular SciencesT32GM068411 · NIGMS · UNIVERSITY OF ROCHESTER · PI MAQUAT, LYNNE E · 2005 to 2019
$3.9M
Protein Interactions Involved in Orthopoxvirus EnvelopmentR01AI067391 · NIAID · UNIVERSITY OF ROCHESTER · PI WARD, BRIAN M · 2007 to 2017
$3.2M
SAMHD1 controls dNTP pool and HIV sensitivity to NRTIsR01GM104198 · NIGMS · UNIVERSITY OF ROCHESTER · PI KIM, BAEK · 2012 to 2018
$2.3M
Targeting PI3K/Akt Cell Survival Pathway as a Novel Anti-HIV TherapyR01AI077401 · NIAID · UNIVERSITY OF ROCHESTER · PI KIM, BAEK · 2009 to 2012
$1.4M
Uncovering poxvirus proteins involved in regulating the IMV to EV transitionR21AI099712 · NIAID · UNIVERSITY OF ROCHESTER · PI WARD, BRIAN M · 2012 to 2013
$408k
Replicational Fidelity and Lentivial PathogenesisR56AI049781 · NIAID · EMORY UNIVERSITY · PI KIM, BAEK · 2017 to 2017
$390k
NIAID NIH HHS AI049781NIAID NIH HHS AI067391NIAID NIH HHS AI077401NIAID NIH HHS AI099712NIAID NIH HHS R01 AI049781NIAID NIH HHS R01 AI067391NIAID NIH HHS R01 AI077401NIAID NIH HHS R21 AI099712NIAID NIH HHS R56 AI049781NIGMS NIH HHS GM068411NIGMS NIH HHS R01 GM104198NIGMS NIH HHS T32 GM068411
6 · The paper itself

Abstract

SAMHD1 is a newly identified anti-HIV host factor that has a dNTP triphosphohydrolase activity and depletes intracellular dNTP pools in non-dividing myeloid cells. Since DNA viruses utilize cellular dNTPs, we investigated whether SAMHD1 limits the replication of DNA viruses in non-dividing myeloid target cells. Indeed, two double stranded DNA viruses, vaccinia and herpes simplex virus type 1, are subject to SAMHD1 restriction in non-dividing target cells in a dNTP dependent manner. Using a thymidine kinase deficient strain of vaccinia virus, we demonstrate a greater restriction of viral replication in non-dividing cells expressing SAMHD1. Therefore, this study suggests that SAMHD1 is a potential innate anti-viral player that suppresses the replication of a wide range of DNA viruses, as well as retroviruses, which infect non-dividing myeloid cells.

Indexed as

Cell LineFemaleHerpesvirus 1, HumanHumansMaleMonomeric GTP-Binding ProteinsMyeloid CellsSAM Domain and HD Domain-Containing Protein 1Vaccinia virusVirus ReplicationMonomeric GTP-Binding ProteinsSAM Domain and HD Domain-Containing Protein 1SAMHD1 protein, human

Identifiers

PMID23825958
PMCPMC3694861
OpenAlexW2020265617

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.