Evidence map›Paper›PMID 23825393›Full record

SynthesisJournal of medical genetics2013

Large-scale genotyping identifies a new locus at 22q13.2 associated with female breast size.

Jingmei Li, Jia Nee Foo, Nils Schoof, Jajini S Varghese, Pablo Fernandez-Navarro, Gretchen L Gierach, Swee Tian Quek, Mikael Hartman, Silje Nord, Vessela N Kristensen and 9 more

Open access · greenAbstract readMeta-Analysis
In one paragraph

Synthesis in Journal of medical genetics, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.4field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 12 citations in OpenAlex.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 7 institutions in 6 countries.

Jingmei LiHuman Genetics, Genome Institute of Singapore, Singapore, Singapore.
Jia Nee Foo
Nils Schoof
Jajini S Varghese
Pablo Fernandez-Navarro
Gretchen L Gierach
Swee Tian Quek
Mikael Hartman
Silje Nord
Vessela N Kristensen
Marina Pollán
Jonine D Figueroa
Deborah J Thompson
Yi Li
Chiea Chuen Khor
Keith Humphreys
Jianjun Liu
Kamila Czene
Per Hall
Genome Institute of Singapore · SGKarolinska Institutet · SENational University of Singapore · SGInstituto de Salud Carlos III · ESNational Institutes of Health · USOslo University Hospital · NOUniversity of Cambridge · GB

Funding

Hormone-Related CancersZIACP010126 · NCI · DIVISION OF CANCER EPIDEMIOLOGY AND GENETICS · PI GIERACH, GRETCHEN · 2009 to 2025
$103.5M
Epidemiologic StudiesU19CA148065 · NCI · HARVARD SCHOOL OF PUBLIC HEALTH · PI AHSAN, HABIBUL, BRUGGE, JOAN SIEFERT · 2010 to 2014
$10.6M
Cancer Research UK C1287/A10118Cancer Research UK C1287/A10710Cancer Research UK C1287/A12014CIHRIntramural NIH HHS ZIA CP010126NCI NIH HHS 1 U19 CA 148065-01NCI NIH HHS U19 CA148065
6 · The paper itself

Abstract

backgroundIndividual differences in breast size are a conspicuous feature of variation in human females and have been associated with fecundity and advantage in selection of mates. To identify common variants that are associated with breast size, we conducted a large-scale genotyping association meta-analysis in 7169 women of European descent across three independent sample collections with digital or screen film mammograms.

methodsThe samples consisted of the Swedish KARMA, LIBRO-1 and SASBAC studies genotyped on iCOGS, a custom illumina iSelect genotyping array comprising of 211 155 single nucleotide polymorphisms (SNPs) designed for replication and fine mapping of common and rare variants with relevance to breast, ovary and prostate cancer. Breast size of each subject was ascertained by measuring total breast area (mm(2)) on a mammogram.

resultsWe confirm genome-wide significant associations at 8p11.23 (rs10086016, p=1.3×10(-14)) and report a new locus at 22q13 (rs5995871, p=3.2×10(-8)). The latter region contains the MKL1 gene, which has been shown to impact endogenous oestrogen receptor α transcriptional activity and is recruited on oestradiol sensitive genes. We also replicated previous genome-wide association study findings for breast size at four other loci.

conclusionsA new locus at 22q13 may be associated with female breast size.

Indexed as

Chromosomes, Human, Pair 22Genome-Wide Association StudyQuantitative Trait LociChromosomes, Human, Pair 8FemaleHumansMammary Glands, HumanMammographyOrgan SizePolymorphism, Single NucleotideCancer: breastComplex traitsEpidemiologyGenetic epidemiologyGenome-wide

Identifiers

PMID23825393
PMCPMC4159740
OpenAlexW1995555631

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.